| Mean PNGs, Number of isolates; % of n | |||
---|---|---|---|---|
Number of isolates, (% of Total) | All Patterns | NXT Pattern | NXS Pattern | NNX (S) T Pattern |
Subtype | ||||
Subtype A1, n = 36 (65.4) | 11.11, 36; 100 | 7.19, 36; 100 | 3.78, 36; 100 | 0.14, 4; 11.1 |
A1r recombinants n = 5 (9.1) | 10.80, 5; 100 | 6.80, 5; 100 | 3.80, 5; 100 | 0.20, 1; 20 |
Subtype A2, n = 4 (7.3) | 10.75, 4; 100 | 7.75, 4; 100 | 3, 4; 100 | 0, 0; 0 |
Subtype C, n = 5 (9.1) | 11.2, 5; 100 | 7.4, 5; 100 | 3.8, 5; 100 | 0, 0; 0 |
Subtype D, n = 5 (9.1) | 12.4, 5; 100 | 8.4, 5; 100 | 3.8, 5; 100 | 0.2, 1; 20 |
Tropism | ||||
CCR5, n = 42 (76.4) | 11.02, 42; 100 | 7.21, 42; 100 | 3.64, 42; 100 | 0.17, 5; 100 |
CXCR4, n = 13 (23.6) | 11.69, 13; 100 | 7.69, 13; 100 | 4, 13; 100 | 0 |
Nucleic Acid Source | ||||
DNA, n = 40 (72.7) | 11.6 a, 40; 100 | 7.68 a, 40; 100 | 3.85, 40; 100 | 0.08, 2; 5 |
RNA, n = 15 (27.3) | 10.07 a, 15; 100 | 6.4 a, 15; 100 | 3.4, 15; 100 | 0.27, 3; 20 |
Total, n = 55 (100) | 11.18, 55; 100 | 7.33, 55; 100 | 3.73, 55; 100 | 0.13, 5; 9.1 |