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Table 2 FAdV strains and isolates used for sequence alignment and phylogenetic analysis

From: Molecular epidemiology of hydropericardium syndrome outbreak-associated serotype 4 fowl adenovirus isolates in central China

Species

Strains and serotypes

Accession no.

Origin

FAdV-A

FAdV-1

U46933.1 (complete genes)

Germany

FAdV-1 CELO

Z67970.1 (complete genes)

Russia

FAdV-B

FAdV-5 340

KC493646.1 (complete genes)

--

FAdV-5 TR22

AF508953.1 (partial cds)

--

FAdV-B 09-7473-2

FN869988.1 (partial cds)

--

FAdV-C

FAdV-4 KR5

HE608152.1 (complete genes)

Austria 2012

FAdV-4 HB1510

KU587519.1 (complete genes)

China 2015

FAdV-4 HN151025

KU245540.1 (complete genes)

China 2015

FAdV-4 JSJ13

KM096544.1 (complete genes)

China 2015

FAdV-4 Kr-Yeoju

HQ709228.1 (complete genes)

Korea 2011

FAdV-4 Kr-Gunwi

HQ709227.1 (complete genes)

Korea 2011

FAdV-4 ON1

GU188428.1 (complete genes)

China 2011

FAdV-4 PJ-06

EU931692.1 (complete genes)

India 2008

FAdV-4 PK-01

EU931693.1 (complete genes)

India 2008

FAdV-4 MX-SHP95

KP295475.1 (complete genes)

Mexico 2015

FAdV-4 HNZZ

KX640901 (complete genes)

China 2016

FAdV-4 HNAY

KX640902 (complete genes)

China 2016

FAdV-4 HB

KX640903 (complete genes)

China 2016

FAdV-4 JZ

KX640904 (complete genes)

China 2016

FAdV-4 XX

KX640905 (complete genes)

China 2016

FAdV-4 XC

KX640906 (complete genes)

China 2016

FAdV-4 LH

KX640907 (complete genes)

China 2016

FAdV-4 PY

KX640908 (complete genes)

China 2016

FAdV-4 KF

KX640909 (complete genes)

China 2016

FAdV-4 SQ

KX640910 (complete genes)

China 2016

FAdV-4 ZK

KX640911 (complete genes)

China 2016

FAdV-4 PDS

KX640912 (complete genes)

China 2016

FAdV-10

U26221 (complete genes)

US 2000

FAdV-D

FAdV-2 SR48

AF508946.1 (partial cds)

--

FAdV-3 SR49

AF508948.2 (partial cds)

--

FAdV-11 C2B

AF508959.2 (partial cds)

US

FAdV-D

AC_000013.1 (complete genes)

--

FAdV-E

FAdV-6 CR119

AF508954.2 (partial cds)

Japan

FAdV-7 YR36

AF508955.1 (partial cds)

Japan

FAdV-8 58

AF508957.1 (partial cds)

--

FAdV-8a TR59

AF508956.2 (partial cds)

Japan

  1. Twelve strains were isolated and confirmed to be FAdV-4 positive by PCR. Sequenced Hexon genes from these strains were edited using DNAStar software, and deposited into GenBank under the accession number KX640901-KX640912. 24 strains from GenBank were used as reference strains. Serotypes, species and origins of these strains were provided. “--” indicated unknown