Fig. 4
From: Ecogenomic survey of plant viruses infecting Tobacco by Next generation sequencing
Phylogenetic analyses of Tobacco mosaic virus isolates and selected strains, with aligned nucleotide sequences, generated using the neighbor-joining method and MEGA6 software. The percentage of replicate trees in which the associated taxa clustered together in the bootstrap test (1000 replicates) is shown next to the branches. The tree was rooted using Odontoglossum ring spot virus (ORSV) as an out group sequence for the phylogenetic analysis