Fig. 3From: Ecogenomic survey of plant viruses infecting Tobacco by Next generation sequencingPhylogenetic analyses of Potato virus Y isolates and selected strains, with aligned nucleotide sequences, generated using the neighbor-joining method and MEGA6 software. The percentage of replicate trees in which the associated taxa clustered together in the bootstrap test (1000 replicates) is shown next to the branches. The tree of the Potyvirus was rooted using Sunflower chlorotic mottle virus (SuCMoV) as an out group sequence for the phylogenetic analysisBack to article page