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Table 1 Pairwise nucleotide (amino acid) % identity between Sabin 1, Sabin 2 and Sabin 3 and 4 PV3 isolates in all sequenced genomic regions

From: Characterization of four vaccine-related polioviruses including two intertypic type 3/type 2 recombinants associated with aseptic encephalitis

Genomic region RF108 RF134 RF146 RF151
Sabin 1 Sabin 2 Sabin 3 Sabin 1 Sabin 2 Sabin 3 Sabin 1 Sabin 2 Sabin 3 Sabin 1 Sabin 2 Sabin 3
5′UTR 80.3 80.4 99.9 80.3 80.4 99.9 80.3 80.4 99.9 80.0 80.2 99.6
VP4 77.3 (92.8) 75.2 (90.6) 100 (100) 77.3 (92.8) 75.2 (92.6) 100 (100) 77.3 (92.8) 75.2 (92.6) 100 (100) 77.3 (92.8) 75.2 (92.6) 100 (100)
VP2 70.3 (82.4) 70.2 (81.2) 99.9 (100) 70.3 (82.4) 70.2 (81.2) 99.9 (100) 70.3 (82.4) 70.2 (81.2) 99.9 (100) 70.5 (82.7) 70.2 (81.2) 99.9 (100)
VP3 72.4 (84.5) 73.4 (86.1) 99.7 (99.2) 72.1 (84.0) 73.4 (86.6) 100 (100) 72.1 (84.0) 73.4 (86.6) 100 (100) 72.1 (84.0) 73.4 (86.6) 100 (100)
VP1 65.1 (74.9) 68.8 (78.5) 99.8 (99.3) 65.1 (74.9) 68.5 (78.5) 99.8 (99.3) 65.3 (75.6) 68.8 (78.5) 99.8 (99.3) 65.1 (74.9) 68.8 (78.5) 99.8 (99.3)
2A 80.8 (94.0) 78.7 (93.3) 99.8 (100) 80.8 (94.0) 78.7 (93.3) 99.8 (100) 80.8 (94.0) 78.7 (93.3) 99.8 (100) 80.8 (94.0) 78.7 (93.3) 99.8 (100)
2B 76.3 (91.8) 81.8 (94.8) 100 (100) 76.3 (91.8) 81.8 (94.8) 100 (100) 76.3 (91.8) 81.8 (94.8) 100 (100) 76.3 (91.8) 81.8 (93.3) 100 (100)
2C 82.1 (97.6) 87.5 (97.6) 97.5 (98.8) 82.8 (97.0) 85.1 (96.4) 99.9 (100) 82.7 (97.0) 85.2 (96.4) 99.8 (100) 82.7 (97.0) 85.1 (96.4) 99.9 (100)
3A 82.8 (98.9) 100 (100) 82.4 (97.7) 85.4 (98.9) 82.4 (97.7) 100 (100) 85.4 (98.9) 82.4 (97.7) 100 (100) 85.4 (98.9) 82.4 (97.7) 100 (100)
3B 83.3 (95.5) 100 (100) 86.4 (95.5) 86.4 (90.9) 84.8 (95.5) 98.5 (100) 86.4 (90.9) 84.4 (95.5) 98.5 (100) 86.4 (90.9) 84.8 (95.5) 98.5 (100)
3C 86.7 (98.4) 99.6 (100) 86.5 (97.3) 89.6 (98.9) 86.5 (97.3) 100 (100) 89.6 (99.5) 86.5 (97.8) 99.6 (99.5) 89.6 (99.5) 86.5 (97.3) 100 (100)
3D 87.1 (97.8) 99.9 (100) 85.8 (97.6) 86.0 (97.8) 92.0 (97.8) 93.5 (99.8) 85.3 (97.0) 85.6 (97.0) 99.6 (99.3) 85.4 (97.4) 92.0 (97.8) 93.5 (99.8)
3′UTR 91.5 95.7 93.0 95.8 100 97.2 91.5 95.7 93.0 91.5 100 97.2
Genome 78.5 (90.7) 84.0 (92.0) 95.1 (98.8) 78.8 (90.5) 80.5 (91.0) 98.7 (99.9) 78.6 (90.5) 79.3 (90.9) 99.7 (99.7) 78.6 (90.50 79.1 (91.0) 99.7 (99.7)
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