Table 2 Comparison of genomic features of the four strains of ERBVs in the present study and ERBV1 and ERBV2 and the amino acid identities between their predicted P1, VP1, P2 and P3
From: Equine rhinitis B viruses in horse fecal samples from the Middle East
Virus | Accession no. | Genome features | Pairwise amino acid identity (%) | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|  |  | Size | G + C | Strain 303 | Strain 396 | Strain 421 | Strain 1228 | ||||||||||||
| Â | Â | (bases) | content | P1 | VP1 | P2 | P3 | P1 | VP1 | P2 | P3 | P1 | VP1 | P2 | P3 | P1 | VP1 | P2 | P3 |
ERBV1 | NC_003983 | 8828 | 0.49 | 78.0 | 69.4 | 97.4 | 96.8 | 78.1 | 69.8 | 96.6 | 97.4 | 77.7 | 69.8 | 98.1 | 97.6 | 73.0 | 66.7 | 97.9 | 96.3 |
ERBV2 | AF361253 | 8821 | 0.50 | 74.8 | 63.3 | 98.1 | 97.7 | 74.9 | 63.8 | 97.4 | 97.5 | 74.3 | 63.4 | 98.1 | 97.0 | 95.3 | 95.3 | 98.4 | 96.7 |
ERBV3a | DQ108385 | - | - | 93.3 | 88.2 | - | - | 94.3 | 91.6 | - | - | 95.3 | 92.6 | - | - | 74.7 | 62.3 | - | - |
Strain 303 | KX260138 | 8828 | 0.50 | - | - | - | - | 94.2 | 88.5 | 97.9 | 98.7 | 94.4 | 90.1 | 98.1 | 98.1 | 75.7 | 64.2 | 98.7 | 97.8 |
Strain 396 | KX260139 | 8831 | 0.50 | 94.2 | 88.5 | 97.9 | 98.7 | - | - | - | - | 95.2 | 92.6 | 97.6 | 98.6 | 75.1 | 63.5 | 97.9 | 98.2 |
Strain 421 | KX260140 | 8830 | 0.50 | 94.4 | 90.1 | 98.1 | 98.1 | 95.2 | 92.6 | 97.6 | 98.6 | - | - | - | - | 75.0 | 64.0 | 98.2 | 97.5 |
Strain 1228 | KX260141 | 8823 | 0.50 | 75.7 | 64.2 | 98.7 | 97.8 | 75.1 | 63.5 | 97.9 | 98.2 | 75.0 | 64.0 | 98.2 | 97.5 | - | - | - | - |