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Fig. 2 | Virology Journal

Fig. 2

From: Analysis of coevolution in nonstructural proteins of chikungunya virus

Fig. 2

Coevolution analysis of nsPs. a-d MSA of all CHIKV nsP sequences (total 209) were analyzed using CAPS software to study coevolving aa within individual nsPs. Mutated aa pairs with correlation value above 0.5 were used for construction of network using Cytoscape software. Edge color varies with correlation value: red (1.0), orange (~0.9), purple (~0.8), light green (~0.7), black (~0.6) and dark green (~0.5). Node names include aa residue positions in individual nsP (as well as in polyprotein)

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