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Table 2 Amino acid differences between recent Florida clade 1 isolates and Ohio/03

From: Characterisation of the epidemic strain of H3N8 equine influenza virus responsible for outbreaks in South America in 2012

Gene

PB2

PB1

PA

PA-X

M1

M2

NS1

NEP/NS2

aa position

63

66

212

398

660

667

684

686

731

94

200

584

621

644

59

259

348

354

409

465

59

227

240

15

59

76

87

66

209

52

64

86

Ohio/03

I

M

I

I

K

V

A

V

I

F

V

R

K

V

E

P

L

T

S

I

E

K

A

V

L

Y

E

E

N

M

K

R

Kentucky/1/11

V

.

V

V

R

I

T

I

V

L

I

Q

R

I

K

S

I

I

N

V

K

.

D

I

M

F

D

K

I

L

R

K

Dubai/1/12

V

V

V

V

R

I

T

I

V

L

I

Q

R

I

K

S

I

I

N

V

K

R

D

I

M

F

D

K

I

L

R

K

RGdS/1/12

V

.

V

V

R

I

T

I

V

L

I

Q

R

I

K

S

I

I

N

V

K

R

D

I

M

F

D

K

I

L

R

K

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Virology Journal

ISSN: 1743-422X