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Fig. 4 | Virology Journal

Fig. 4

From: Characterisation of the epidemic strain of H3N8 equine influenza virus responsible for outbreaks in South America in 2012

Fig. 4

Comparison of HA amino acid sequences. Rio Grande do Sul/1/12 and 2011–12 Florida clade 1 strains from the USA were aligned to the OIE-recommended vaccine strains Ohio/03 and South Africa/4/03 strains (top). Additional complete and partial sequences available from the South American outbreak were also included for Dubai/1-3/12, Argentina/E-2397-3/12, Argentina/E-2345-1/12, Colina/2/12, São Paulo/IB19/12 and Uruguay/E-1918-1/12. Kentucky/97, a vaccine strain used during the outbreak, is also shown. Amino acid identity is represented with a dot

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Virology Journal

ISSN: 1743-422X