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Table 1 Primers and conditions for real-time RT-PCR

From: Human H7N9 virus induces a more pronounced pro-inflammatory cytokine but an attenuated interferon response in human bronchial epithelial cells when compared with an epidemiologically-linked chicken H7N9 virus

Cytokines

Primers

     
 

Forward

Backward

Mg conc. (mM)

Denaturation

Annealing

Extension

TNF-α

GCCAGAGGGCTGATTAGAGA

CAGCCTCTTCTCCTTCCTGAT

2

95 °C 10s

60 °C 5 s

72 °C 5 s

MCP-1

GCAATCAATGCCCCAGTCA

TGCTGCTGGTGATTCTTCTATAGCT

2

95 °C 10s

55 °C 5 s

72 °C 5 s

IL-6

GGTACATCCTCGACGGCATCT

GTGCCTCTTTGCTGCTTTCAC

2

95 °C 10s

55 °C 5 s

72 °C 5 s

IFN-β

GCCGCATTGACCATCT

CACAGTGACTGTACTCCT

4

95 °C 10s

55 °C 5 s

72 °C 11 s

IFNL1

GAAGCAGTTGCGATTTAGCC

GAAGCTCGCTAGCTCCTGTG

2

95 °C 10s

60 °C 5 s

72 °C 7 s

IL-10

CAAATGAAGGATCAGCTGGACAA

GCATCACCTCCTCCAGGTAAAAC

2

95 °C 10s

55 °C 5 s

72 °C 5 s

TGF-β

CCCAGCATCTGCAAAGCTC

GTCAATGTACAGCTGCCGCA

2

95 °C 10s

55 °C 5 s

72 °C 5 s

IL-8

AGCTGGCCGTGGCTCTCT

CTGACATCTAAGTTCTTTAGCACTCCTT

2

95 °C 10s

55 °C 5 s

72 °C 5 s

GAPDH

ATTCCACCCATGGCAAATTC

CGCTCCTGGAAGATGGTGAT

2

95 °C 10s

55 °C 5 s

72 °C 5 s