Fig. 2
From: Molecular characterisation of a novel recombinant Ribgrass mosaic virus strain FSHS
a Phylogenetic analysis of complete genome of recombinant RMV strain FSHS with genomes of 33 different tobamoviruses (condensed NJ tree with pairwise gap deletion, substitution including transitions + transversions and uniform rate of evolution options) indicates placement of the new genome in RMV cluster, and also distinct clustering of TVCV, RMV and YoMV genomes within sub group 3. Shaded and open arrows represent the major and minor parents respectively; b ML (GTRCAT) tree depicts the phylogenetic relationship of RMV strain FSHS within RMV cluster and the alignment of recombinant fragments with the major and minor parents. Larger fragment of strain FSHS (†) aligns with the major parent RMV strain NZ-439 (▲) and 659nts segment of recombinant strain (§) aligns with the minor parent RMV strain Actinidia-AC (shaded box)