Table 1 Nucleotide and amino acid sequence identity for TSWV isolates in China

RNA L

CL1

CL2

CL3

CL4

CL5

CL1

99.52

99.44

99.35

99.17

CL2

99.17

99.46

99.35

99.20

CL3

99.13

99.20

99.37

99.29

CL4

97.43

97.53

97.46

99.18

CL5

97.46

97.60

97.60

97.64

RNA M

CM1

CM2

CM3

CM4

CM5

CM1

99.29

99.41

99.62

97.97

CM2

99.34(98.77)

99.29

99.31

97.74

CM3

99.34(99.21)

99.34(98.85)

99.43

97.84

CM4

99.34(99.65)

99.34(98.77)

99.34(99.21)

97.99

CM5

98.01(99.56)

98.01(98.85)

98.01(99.30)

98.01(99.56)

RNA S

CS1

CS2

CS3

CS4

CS5

CS6

CS1

99.43

99.56

99.43

95.63

99.56

CS2

98.72(98.84)

99.39

99.26

95.73

99.39

CS3

98.93(99.22)

98.93(99.61)

99.56

95.80

99.76

CS4

98.93(98.06)

98.93(98.45)

99.14(98.84)

95.59

99.60

CS5

97.00(98.45)

97.00(98.84)

97.64(99.22)

97.22(98.84)

95.86

CS6

99.14(98.84)

99.14(99.22)

99.79(99.61)

99.36(99.22)

97.86(99.61)