Target
|
Oligo
|
Sequencea
|
Nucleotide positionb
|
---|
S-RNA
|
Forward primer
|
TCCTCCAAYTTGTCCTGGTYATC
|
350–372
|
|
Reverse primer
|
AGATGAGGCATAGCAGCAGGAT
|
432–410
|
|
Probe (AS)
|
ATGATAAAACGCCGCAGACACATCCARC
|
400–373
|
pgRNA
|
Forward primer
|
GGTCCCCTAGAAGAAGAACTCCCT
|
2367–2390
|
|
Reverse primer
|
CATTGAGATTCCCGAGATTGAGAT
|
2454–2431
|
|
Probe
|
TCTCAATCGCCGCGTCGCAGA
|
2408–2428
|
cccDNA
|
Forward primer
|
CCGTGTGCACTTCGCTTCA
|
1575–1593
|
|
Reverse primer
|
GCACAGCTTGGAGGCTTGA
|
1882–1864
|
|
Probe
|
CATGGAGACCACCGTGAACGCCC
|
1607–1629
|
-
aY, T or C; R, A or G; AS, antisense
-
bPosition in genotype A genome