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Table 2 Oligonucleotide sequences of primers and probes

From: Mechanisms downstream of reverse transcription reduce serum levels of HBV DNA but not of HBsAg in chronic hepatitis B virus infection

Target

Oligo

Sequencea

Nucleotide positionb

S-RNA

Forward primer

TCCTCCAAYTTGTCCTGGTYATC

350–372

 

Reverse primer

AGATGAGGCATAGCAGCAGGAT

432–410

 

Probe (AS)

ATGATAAAACGCCGCAGACACATCCARC

400–373

pgRNA

Forward primer

GGTCCCCTAGAAGAAGAACTCCCT

2367–2390

 

Reverse primer

CATTGAGATTCCCGAGATTGAGAT

2454–2431

 

Probe

TCTCAATCGCCGCGTCGCAGA

2408–2428

cccDNA

Forward primer

CCGTGTGCACTTCGCTTCA

1575–1593

 

Reverse primer

GCACAGCTTGGAGGCTTGA

1882–1864

 

Probe

CATGGAGACCACCGTGAACGCCC

1607–1629

  1. aY, T or C; R, A or G; AS, antisense
  2. bPosition in genotype A genome