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Table 2 qPCR results on original and archived PAHC duplicate oropharangeal swabs from five pools screening potentially positivea

From: Molecular evidence of Ebola Reston virus infection in Philippine bats

Pool

Animal ID

Species

Location

Original sample pool Ct

Original sample: individual Ct

Duplicate sample: individual Ct

2

U95

C. brachyotis

Puning Cave

42.0/ND

 

41.2/ND

U96

Pt. jagori

Puning Cave

  

U97

Pt. jagori

Puning Cave

  

U98

Pt. jagori

Puning Cave

  

U99

Pt. jagori

Puning Cave

  

3

R1

M. australis

Biak na Bato

43.0/ND

  

R2

M. australis

Biak na Bato

  

R3

M. australis

Biak na Bato

  

R4

M. australis

Biak na Bato

 

39.3/ND

R5

M. australis

Biak na Bato

  

4

T67

M. australis

Biak na Bato

40.6/41.9b

  
 

T68

M. australis

Biak na Bato

   
 

T69

M. schreibersii c

Biak na Bato

 

33.6d

 
 

T70

M. schreibersii c

Biak na Bato

 

37.7d

39.9/ND

 

T71

M. schreibersii c

Biak na Bato

 

32.9d

40.1/ND

 

T72

M. schreibersii e

Biak na Bato

   
 

T73

M. schreibersii e

Biak na Bato

   
 

T74

M. schreibersii e

Biak na Bato

  

40.5/ND

 

T75

M. schreibersii e

Biak na Bato

   
 

T76

M. schreibersii e

Biak na Bato

   

6

T56

Ch. plicata

Biak na Bato

39.7/40.1b

  
 

T57

Ch. plicata

Biak na Bato

   
 

T58

Ch. plicata

Biak na Bato

   
 

T59

Ch. plicata

Biak na Bato

   
 

T60

M. schreibersii

Biak na Bato

   

12

U21

M. australis

Biak na Bato

40.2/ND

 

42.2/ND

 

U22

M. australis

Biak na Bato

  
 

U23

Ch. plicata

Biak na Bato

  
 

U24

Ch. plicata

Biak na Bato

  
 

U25

Ch. plicata

Biak na Bato

  
  1. aAll samples were tested in duplicate. Positive samples were confirmed in triplicate
  2. bPools 4 and 6 had repeatable results on the original pooled sample
  3. cT69, T70 and T71 yielded a product on hemi-nested PCR whose sequence differed by one nucleotide from a pig isolate in Bulacan province
  4. dMean value of the duplicates
  5. eAdditional M. schreibersii samples from a pool which tested negative in the original round