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Table 2 Primers for the detection of adenoviral serotypes

From: Incidence of human adenoviruses and Hepatitis A virus in the final effluent of selected wastewater treatment plants in Eastern Cape Province, South Africa

Species

Serotype

Primer

Sequence (5′ to 3′)

Target region

B

Ad3

Ad3F

GGTAGAGATGCTGTTGCAGGA

Ad3 hexon

 

Ad3R

CCCATCCATTAGTGTCATCGGT

 

Ad7

Ad7F

GGAAAGACATTACTGCAGACA

Ad7 hexon

 

Ad7R

AATTTCAGGCGAAAAAGCGTCA

 

Ad21

Ad21F

GAAATTACAGACGGCGAAGCC

Ad21 hexon

 

Ad21R

AACCTGCTGGTTTTGCGGTTG

 

C

 

AdCF

TGCTTGCGCTHAAAATGGGCA

AdC fiber

Ad1

Ad1R

CGAGTATAAGACGCCTATTTACA

Ad1 fiber

Ad2

Ad2R

CGCTAAGAGCGCCGCTAGTA

Ad2 fiber

Ad5

Ad5R

ATGCAAAGGAGCCCCGTAC

Ad5 fiber

Ad6

Ad6R

CTTGCAGTCTTTATCTGAAGCA

Ad6 fiber

E

Ad4

Adeno4.U3

CAAGGACTACCAGGCCGTCA

Ad4 hexon

Adeno4.L1

TTAGCATAGAGCATGTTCTGGC

F

 

AdF1

ACTTAATGCTGACACGGGCAC

Fiber

Ad40

K402

CAC TTA ATG CTG ACA CG

 

Ad41

K403

ACT GGA TAG AGC TAG CG