Table 2 Primers used to amplify the complete CV-A4 genome
From: Outbreak of febrile illness caused by coxsackievirus A4 in a nursery school in Beijing, China
Primer name | Primer sequence | Fragment (bp) |
|---|---|---|
F1 | TTTAAAACAGCCTGTGGGTTG | ~300 |
R1 | AACCCATAGGCAGGCCGCC | |
cox241 | ACCCGGCTAACTACTTCGAGAAAC | 1853 |
cox2093 | ATGAATGAGCCCGTAAACATGAAA | |
M1908 | AGGTGTAAGCCGGTTGCTCATAC | 1025 |
M2932 | CACTGGAACGATTCTCGAGCATC | |
VP1A(2319) | CTTCGTAGTGCCACCAGACAC | 1066 |
VP1S(3384) | AGCTCCAGATTGTTGACCGA | |
N2846 | TCACCTTCGTCACCAATCTAG | 1012 |
N3857 | CCTGGAGACTGCGTCAGTGA | |
bcox3615 | CAGTGAGTACTACCCTGCCAGGTATCAA | 1318 |
bcox4932 | TGCGGTGTTATTTTCAGAGCACAGTTTG | |
ccox4610 | AGCAAGTGGTCACTGTCATGGATGA | 1324 |
ccox5933 | CCTGCACAAAAGCCCTGCCTGCCAT | |
dcox5856 | TGGAGGAGTAGTTACATCAGTTGGA | 1548 |
dcox7403 | CAGTTATGTTCACGACCAGATTTCT | |
ecox-a(race pcr 3′) | ATGCCAATGAAGGAGATTCATGAGTCC | ~300 |