Table 1 Summary of representative PEDV sequences used in this study
Strain | Country | Accession no. | Full length |
|---|---|---|---|
CV777 | Belgium | AF353511 | 28033 bp |
SM98 | Korea | GU937797 | 27994 bp |
Attenuated DR13 | Korea | JQ023162 | 27931 bp |
Virulent DR13 | Korea | JQ023161 | 28029 bp |
LZC | China | EF185992 | 28042 bp |
CH/S | China | JN547228 | 28026 bp |
JS2008 | China | KC210146 | 27954 bp |
SD-M | China | JX560761 | 27953 bp |
CH/FJND-3/2011 | China | JQ282909 | 28038 bp |
BJ-2011-1 | China | JN825712 | 28038 bp |
CHGD-01 | China | JX261936 | 28047 bp |
AJ1102 | China | JX188454 | 28044 bp |
FL2013 | China | KP765609 | 28044 bp |
CH/GDGZ/2012 | China | KF384500 | 28035 bp |
CH/FJZZ-9/2012 | China | KC140102 | 28038 bp |
CH/ZMDZY/11 | China | KC196276 | 28038 bp |
GD-1 | China | JX647847 | 28047 bp |
ZJCZ4 | China | JX524137 | 28038 bp |
LC | China | JX489155 | 28047 bp |
GD-A | China | JX112709 | 28035 bp |
GD-B | China | JX088695 | 28038 bp |
JS-HZ2012 | China | KC210147 | 28037 bp |
AH2012 | China | KC210145 | 28039 bp |
USA/Colorado/2013 | USA | KF272920 | 28038 bp |
USA/Iowa/18984/2013 | USA | KF804028 | 28039 bp |
MN | USA | KF468752 | 28038 bp |
ISU13-22038-IA-homogenate | USA | KF650373 | 28038 bp |
ISU13-19338E-IN-homogenate | USA | KF650370 | 28038 bp |
IA2 | USA | KF468754 | 28038 bp |
IA1 | USA | KF468753 | 28038 bp |
13-019349 | USA | KF267450 | 28038 bp |