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Table 1 Motifs of the Rep from the novel gemycircularviruses and reference gemycircularviruses

From: Fecal virome analysis of three carnivores reveals a novel nodavirus and multiple gemycircularviruses

Virus name Size (nt) Nonanucleotide motif Motif I Motif II GRS Motif III Walker-A Walker-B
Mongoose feces-associated gemycircularvirus a 2089 TATAAATAC LLTYA HLHSFID DIFDVDGCHPNVSPTH YACKD GPSRMGKT VFDDI
Mongoose feces-associated gemycircularvirus b 2189 TATAAATAC LFTYS HYHVFDV RKFDVEGFHPNIVPSL YATKD GRSKTGKT VFDDI
Mongoose feces-associated gemycircularvirus c 2124 TAATATTAC LFTYS HLHAFVD RKFDVEGFHPNIISTS YATKD GPSRTGKT VFDDI
Mongoose feces-associated gemycircularvirus d 2251 TAATATTAT LLTYA HLHCFVD RVFDVGGFHPNISPSR YAIKD GRSLTGKT VLDDV
Badger feces-associated gemycircularvirus 2113 TAATACTAT LLTYA HLHAFVH TVFDVAGFHPNISPSF YAIKD GPSRVGKT VFDDI
MSSI2.225 virus 2259 TAATGTTAT LLTYP HLHAFVD RAFDVEGCHPNVSPSP YAIKD GGKLSCTS IFDDF
Fecal associated gemycircularvirus 1a 2197 TAATATTAT LLTYA HLHAFVD DVFDVGGRHPNLVPSY YAIKD GDTRLGKT VFDDM
Faecal associated gemycircularvirus 4 2224 TAATGTTAT LLTYA HLHAFCD DVFDVGGFHPNIEASR YAIKD GDTRLGKT VFDDM
Fecal associated gemycircularvirus 5 2187 TAATATTAT LVTYP HLHVFCD DIFDVGGFHPNIERSK YACKD GDALTGKT VIDDI
Cassava-associated circular DNA virus 2220 TAATATTAT LITYA HLHCFID DIFDVDGRHPNIEPSW YAIKD GDSRSGKT IFDDI
Dragonfly-associated circular DNA virus-2 2236 TAATATTAT LVTYP HLHCFAD DIFDVDGCHPNIQPST YAIKD GESRTGKT IFDDI
Mosquito VEM virus SDBVL G 2238 TAATATTAT LLTYA HFHAFLD RFWDIAGRHPNIARVG YAIKD GPSRTGK? VFDDI