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Table 1 Bat species tested for coronaviruses

From: Diversity of coronavirus in bats from Eastern Thailand

Family

Species

No. of positive/total‡ (%)

Sampling site (year)†

CoV clade(s) [cluster]/(no. positive)

Pteropodidae

Cynopterus brachyotis

1/9 (11.1)

AA(2011*); TR(2011)

5 [HKU10]/(1)

Cynopterus sphinx

4/14 (28.6)

AA(2011); RD(2008); TR(2011); CB(2012*)

7 [New cluster]/(2), 8 [HKU9]/(2)

Eonycteris spelaea

0/11 (0)

AA(2011); TR(2011); CB(2012)

 

Rousettus amplexicaudatus

0/3 (0)

SK(2011)

 

Emballonuridae

Taphozous longimanus

0/12 (0)

RD(2008/2012)

 

Taphozous melanopogon

2/123(1.6)

RD(2012*/2013); CK(2012); SK(2011*/2012)

2 [HKU7]/(1), 5 [HKU10]/(1)

Hipposideridae

Hipposideros armiger

2/140(1.4)

CK(2012); RD(2008/2012*/2013); SK(2012)

1 [CoV1A/B]/(1), 5 [HKU10]/(1)

Hipposideros cineraceus

0/3

CK(2012)

 

Hipposideros larvatus

1/29(3.4)

CK(2012); RD(2008/2012/2013*)

9 [SARS]/(1)

Hipposideros lekaguli

10/159(6.3)

CK(2008*/2012*)

1 [CoV1A/B]/(2), 5 [HKU10]/(6), 8 [HKU9]/(2)

Macroglossinae

Macroglossus sobrinus

0/2(0)

AA(2011); TR(2011)

 

Megadermatidae

Megaderma lyra

1/2 (50)

RD(2012*/2013)

5 [HKU10]/(1)

Rhinolophidae

Rhinolophus shameli

2/20(10)

CK (2012*)

5 [HKU10]/(1), 6 [HKU2]/(1)

Vespertilionidae

Miniopterus magnater

6/30(20)

CK (2012*)

1 [CoV1A/B]/(5), 2 [HKU7]/(2**)

Miniopterus pusillus

1/1(100)

CK(2012*)

3 [HKU8]/(1)

Miniopterus schreibersii

12/53(22.6)

CK(2008*/2012)

1 [CoV1A/B]/(3), 2 [HKU7]/(1), 3 [HKU8]/(8)

Myotis horsfieldii

0/4(0)

CK(2012); CB(2012)

 

Scotophilus kuhlii

2/3(66.7)

CB(2012*)

7 [New cluster]/(2)

Scotophilus heathii

3/8(37.5)

CB(2012*)

4 [CoV 512]/(2), 7 [New cluster]/(1)

 

Total

47/626(7.5)

  
  1. ‡Samples were 84 fecal and 542 rectal swabs; *A positive location (and year) is indicated by an asterisk; First report of CoV in species (indicated in bold).
  2. †AA = Ang Aed, Chataburi; CB = Chonburi; CK = Chakan, Srakaew; RD = Rad, Chachongsao; SK = Sarika, Chantaburi; TR = Trat.
  3. **Sample No. BRT55593 (Miniopterus magnater) contained 2 different CoV species belong to clade 1 and 2.