Table 2 Nucleotide polymorphisms in whole genome sequences of the 22 brucellaphage genomes studied

Locus

2868

3357

7313

7799

8715

11046

13192

15576

15578

15774

15775

15996

16003

16012

16064

16700

16952

16984

Coding Δ

C/T(D)

G(R) T(L)

T(I) G(S)

A(K) C(T)

A/G(Q)

C(L) A(I)

C(T) A(N)

T(L) G(R)

C(D) A(E)

C(P) T(S)

C(S) T(L) A(H)

G(A) A(T) C(P)

T(V) GG)

A(E) C(A)

A(K) T(N)

C/T (N)

A/G (S)

C(S) A(Y)

Codon p.

3rd

2nd

2nd

2nd

1st

1st

2nd

1st

3rd

1st

2nd

1st

2nd

2nd

3rd

2nd

2nd

1st

TbM

C

G

G

A

A

C

C

G

C

C

C

G

G

C

T

C

G

C

Pr

C

G

G

A

A

C

C

G

C

C

C

G

G

C

T

C

G

C

TbW

C

G

G

A

A

C

C

G

C

C

C

G

G

C

T

C

A

C

TbE _141

T

T

G

A

A[G]

C

C

G[T]

C[A]

T

C

A

T

A

A

C

A

C

TbE _19

T

T

G

A

A[G]

C

C

G

C

T

C

A

T

A

A

C

A

C

02_141

T

T

G[T]

A

A

A

A

G

C

T

C

A

T

A

A

T

A

A

02_19

T

T

G[T]

A

A

A

A

G

C

T

C

A

T

A

A

T

A

A

11sa_141

T

G

G

A

A

C

C

G

C

C

T

G

T

A

A

C

A

C

11sa_19

T

T

T

A

A

A

A

G

C

T

C

A

T

A

A

T

A

A

141_141

T

G[T]

G

C

A

C

C

G

C

C

C

G

T

A

A

C

A

C

141_19

T

G[T]

G

C

A

C

C

G

C

C

C

G

T

A

A

C

A

C

177_141

T

T

G[T]

A

A[G]

C[A]

C[A]

G

C

T

C

A

T

A

A

C

A

C

177_19

T

T

G[T]

A

A

C[A]

C[A]

G

C

T

C

A

T

A

A

C

A

C

281_141

T

T

G[T]

A

A[G]

C[A]

C[A]

G

C

T

C

A

T

A

A

C

A

C

281_19

T

G

G

C

A

C

C

G

C

C

C[A]

C

T

A

A

C

A

C

544_141

T

G[T]

G

A

A[G]

C

C

G

C

C[T]

C

G[A]

T

A

A

C

A

C

544_19

T

G[T]

G

A

A[G]

C

C

G

C

C[T]

C

G[A]

T

A

A

C

A

C

1066_141

T

T

G

C

A

C

C

G

C

C

C[A]

G

T

A

A

C

A

C

1066_19

T

G[T]

G[T]

A[C]

A

C[A]

C[A]

G

C

C[T]

C[T]

G[A]

T

A

A

C[T]

A

C[A]

V_141

T

G

G

A

A

C

C

G

C

T

T

A

T

A

A

C

A

C

V_19

T

T

G[T]

A

A

A

A

G

C

T

C

A

T

A

A

T

A

A

110_141

T

T

G[T]

A

A

A[C]

A

G

C

T

C

A

T

A

A

T

A

A

110_19

T

T

G[T]

A

A[G]

A[C]

C[A]

G

C

T

C

T

T

A

A

C

A

C

ORF

25

26

27

27

27

27

27

27

27

27

27

39

42

43

58

NC

NC

Locus

19780

21544

21769

21815

22178

22364

22409

22466

22469

22470

22472

28322

29512

29915

39320

40644

41105

Coding Δ

C(P) A(H)

G (C ) T(S)

C(A) A(E)

G(D) T(Y)

G(D) T(Y)

G(D) T(Y)

G(V) T(F)

A(S) C(A)

A(K) G(A)

A(K) C(A)

A(N) T(Y)

G(L) T(M)

T(N) C(D)

C(L) A(Y)

C(I) A(Y)

NA

NA

Codon p.

3rd

1st

3rd

1st

1st

1st

1st

1st

1st

2nd

1st

3rd

3rd

3rd

3rd

NA

NA

TbM

C

G

C

G

G

G

G

C

A

A

A

G

T

C

A

A

C

Pr

C

G

C

G

G

T

G

A

A

G

A

G

T

A

C

A

T

TbW

C

G

C

G

G

T

G

A

A

C

A

G

T

C

C

T

T

TbE _141

C

G

C

G[T]

T

T

T

A

G

C

T

G

C

C

C

T

T

TbE _19

C[A]

G

C

G

T[G]

T

T

A

G

C

T

G

C

C

C

T

T

02_141

C

G

C

G

G

T

G

A

G

C

T

G[T]

C

C

C

T

T

02_19

C

G

C

G

G

T

G

A

G

C

T

G[T]

C

C

C

T

T

11sa_141

C

G

C

G

G

G[T]

G

A

A

A

T

G

T

C

C

T

T

11sa_19

C

G

C

G

G

T

G

A

G

C

T

G[T]

C

C

C

T

T

141_141

C

G

C[A]

G

G

T

G

A

A

A

T

G

C

C

C

T

T

141_19

C

G

C[A]

G

G

T

G

A

A

A

T

G

C

C

C

T

T

177_141

C[A]

G

C

G

T

T

T

A

G

C

T

G

C

C

C

T

T

177_19

C[A]

G

C

G

T

T

T

A

G

C

T

G

C

C

C

T

T

281_141

C[A]

G

C

G

T

T

T

A

G

C

T

G

C

C

C

T

T

281_19

C

T

C[A]

G

G

G[T]

G

A

A

A

T

G

C

C

C

T

T

544_141

C

G

C

G

G

T

T

A

A[G]

A[C]

T

G

T[C]

C

C

T

T

544_19

C

G

C

G

G

T

T

A

A[G]

A[C]

T

G

T[C]

C

C

T

T

1066_141

C

G

C[A]

G

G

G[T]

G

A

A

A

T

G

C

C

C

T

T

1066_19

C[A]

G

C[A]

G

G[T]

G[T]

G[T]

A

A[G]

A[C]

T

G[T]

T[C]

C

C

T

T

V_141

C

G

C

G

G

G[T]

T

A

A

A

T

G

T

C

C

T

T

V_19

C

G

C

G

T

T

G

A

G

C

T

G[T]

C

C

C

T

T

110_141

C

G

C

G

G

T

G

A

G

C

T

T

C

C

C

T

T

110_19

A

G

C

G

T

T

T

A

G

C

T

G

C

C

C

T

T