Table 1 Information of JEV isolates analyzed in this study
Strain | Date | Country | Host a | Genotype | GenBank accession no. |
|---|---|---|---|---|---|
47 | 1950’s | China:Heilongjiang | CSF | 3 | JF706269 |
14178 | 2001 | India | - | 3 | EF623987 |
57434 | 2005 | India | - | 3 | EF623988 |
04940-4 | 2002 | India | - | 3 | EF623989 |
B58 | 1989 | China:Yunnan | Bat | 3 | FJ185036 |
Beijing-1 | 1949 | China | Human brain | 3 | L48961 |
BL06-50 | 2006 | China:Guangxi | Culex tritaeniorhynchus | 1 | JF706270 |
BL06-54 | 2006 | China:Guangxi | Culex tritaeniorhynchus | 1 | JF706271 |
CBH | 1954 | China:Fujian | CSF | 3 | JN381860 |
CH-13 | 1957 | China:Sichuan | CSF | 3 | JN381870 |
CH1392 | 1990 | Taiwan | Culex tritaeniorhynchus | 3 | AF254452 |
CTS | 1955 | China:Fujian | CSF | 3 | GQ429184 |
CZX | 1954 | China:Fujian | CSF | 3 | JN381865 |
DH107 | 1989 | China:Yunnan | Aedes lineatopennis | 3 | JN381873 |
DL04-29 | 2004 | China:Yunnan | Culex theileri | 3 | JF706272 |
DL04-45 | 2004 | China:Yunnan | Ar. Subalbatus & Mansonia uniform | 3 | JN381854 |
Fj02-29 | 2002 | China:Fujian | CSF | 3 | JF706273 |
Fj02-76 | 2002 | China:Fujian | Human blood | 3 | JN381867 |
FJ03-39 | 2003 | China:Fujian | Human blood | 3 | JN381859 |
FJ03-94 | 2003 | China:Fujian | Human blood | 3 | JN381858 |
FU | 1995 | Australia | Human serum | 2 | AF217620 |
G35 | 1954 | China:Fujian | Mosquito pool | 3 | GQ429185 |
GB30 | 1997 | China:Yunnan | Murina aurata brain tissue | 3 | FJ185037 |
GP78 | 1978 | India | Human brain | 3 | AF075723 |
GS07-TS11 | 2007 | China:Gansu | Culex tritaeniorhynchus | 1 | JN381843 |
GSBY0801 | 2008 | China:Gansu | Culex tritaeniorhynchus | 1 | JF706274 |
GSBY0804 | 2008 | China:Gansu | Culex tritaeniorhynchus | 1 | JN381844 |
GSBY0810 | 2008 | China:Gansu | Culex tritaeniorhynchus | 1 | JN381840 |
GSBY0816 | 2008 | China:Gansu | Culex tritaeniorhynchus | 1 | JN381842 |
GSBY0827 | 2008 | China:Gansu | Culex tritaeniorhynchus | 1 | JN381845 |
GSBY0861 | 2008 | China:Gansu | Culex tritaeniorhynchus | 1 | JN381833 |
GSS | 1960’s | China:Beijing | CSF | 3 | JF706275 |
GX0519 | 2005 | China:Guanxi | Culex tritaeniorhynchus | 1 | JN381835 |
GX0523/44 | 2005 | China:Guanxi | Culex tritaeniorhynchus | 1 | JN381832 |
GZ04-2 | 2004 | China:Guizhou | Armigeres | 3 | JN381857 |
GZ56 | 2006 | China:GuiZhou | CSF | 1 | HM366552 |
Ha-3 | 1960’s | China:Heilongjiang | CSF | 3 | JN381872 |
HB49 | 1990 | China:Yunnan | Rousettus leschenaulti blood | 3 | JF706284 |
HB97 | 1990 | China:Yunnan | Rousettus leschenaulti blood | 3 | JF706285 |
HLJ02-134 | 2002 | China:Heilongjiang | Genus culicoides | 3 | JF706276 |
HN04-11 | 2004 | China:Henan | Culex | 1 | JN381831 |
HN04-21 | 2004 | China:Henan | Culex | 1 | JN381841 |
HN06129 | 2006 | China:Henan | Armigeres | 1 | JF706277 |
HN0621 | 2006 | China:Henan | Culex | 1 | JN381830 |
HN0626 | 2006 | China:Henan | Culex | 1 | JN381837 |
HVI | 1965 | Taiwan | Mosquito | 3 | AF098735 |
HYZ | 1979 | China:Yunnan | Patient blood | 3 | JN381853 |
Ishikawa | 1994 | Japan | Culex tritaeniorhynchus | 1 | AB051292 |
JaGAr 01 | 1959 | Japan | Cluex | 3 | AF069076 |
JaOArS982 | 1982 | Japan | Mosquito | 3 | M18370 |
JaOH0566/Japan/1966/human | 1966 | Japan | Human | 3 | AY508813 |
JEV/sw/Mie/40/2004 | 2004 | Japan | Swine serum | 1 | AB241118 |
JEV/sw/Mie/41/2002 | 2002 | Japan | Swine serum | 1 | AB241119 |
JH04-18 | 2004 | China:Yunnan | Whitmorei & Anophelessinensis | 3 | JN381855 |
JKT6468 | 1981 | Indonesia | Mosquito | 4 | AY184212 |
K87P39 | 1987 | South Korea | Mosquito | 3 | AY585242 |
KV1899 | 1999 | Korea | Swine | 1 | AY316157 |
LFM | 1955 | China:Fujian | Human blood | 3 | JN381863 |
Ling | 1965 | Taiwan | Human brain | 3 | L78128 |
LN02-102 | 2002 | China:liaoning | Culex modestus | 1 | JF706278 |
LN0716 | 2007 | China:Liaoning | Culex tritaeniorhynchus | 1 | JN381849 |
LYZ | 1957 | China:Fujian | CSF | 3 | JN381869 |
M28 | 1977 | China:Yunnan | Culex pseudovishnui | 1 | JF706279 |
Nakayama | 1935 | Japan | Human brain | 3 | EF571853 |
P3 | 1949 | China:Beijing | Human brain | 3 | U47032 |
RP-2 ms | 1985 | Taiwan | Mosquito | 3 | AF014160 |
RP-9 | 1985 | Taiwan | Mosquito | 3 | AF014161 |
SA14 | 1954 | China | Mosquito | 3 | U14163 |
SC04-12 | 2004 | China:Sichuan | Culex | 1 | JN381839 |
SC04-15 | 2004 | China:Sichuan | Culex tritaeniorhynchus | 1 | JN381838 |
SD0810 | 2008 | China:Shandong | Culex tritaeniorhynchus | 1 | JF706286 |
SH03-103 | 2003 | China:Shanghai | Culex tritaeniorhynchus | 1 | JN381847 |
SH03-105 | 2003 | China:Shanghai | Culex tritaeniorhynchus | 1 | JN381846 |
SH04-10 | 2004 | China:Shanghai | Culex tritaeniorhynchus | 3 | JN381856 |
SH04-5 | 2004 | China:Shanghai | Culex tritaeniorhynchus | 3 | JN381866 |
SH17M-07 | 2007 | China | - | 1 | EU429297 |
SH-3 | 1987 | China:Shanghai | CSF | 3 | JN381864 |
SH-53 | 2001 | China:Shanghai | Culex tritaeniorhynchus | 1 | JN381850 |
SH-80 | 2001 | China:Shanghai | Culex tritaeniorhynchus | 1 | JN381848 |
T1P1 | 1997 | Taiwan | Armigeres subalbatus | 3 | AF254453 |
TLA | 1971 | China:Liaoning | CSF | 3 | JN381868 |
Vellore P20778 | 1958 | India | Human brain | 3 | AF080251 |
XJ69 | 2007 | China | Culex pipiens pallens | 1 | EU880214 |
XJP613 | 2007 | China | Culex tritaeniorhynchus | 1 | EU693899 |
XZ0938 | 2009 | China:Xizang | Culex tritaeniorhynchus | 1 | HQ652538 |
YLG | 1955 | China:Fujian | CSF | 3 | JF706280 |
YN | 1954 | China:Yunnan | CSF | 3 | JN381871 |
YN05124 | 2005 | China:Yunnan | Culex tritaeniorhynchus | 1 | JF706281 |
YN05155 | 2005 | China:Yunnan | Culex tritaeniorhynchus | 1 | JN381852 |
YN0623 | 2006 | China:Yunnan | Culex tritaeniorhynchus | 1 | JN381836 |
YN0911 | 2009 | China:Yunnan | Culex tritaeniorhynchus | 1 | JF706267 |
YN0967 | 2009 | China:Yunnan | Culex tritaeniorhynchus | 1 | JF706268 |
YN79-Bao83 | 1979 | China:Yunnan | Culex tritaeniorhynchus | 1 | JN381851 |
YN82-BN8219 | 1982 | China:Yunnan | Mosquito | 1 | JN381834 |
YN83-Meng83-54 | 1983 | China:Yunnan | Lasiohelea taiwana Shiraki | 1 | JF706282 |
YN98-A151 | 2003 | China:Yunnan | Mosquitoes | 3 | JN381861 |
ZMT | 1955 | China:Fujian | CSF | 3 | JF706283 |
ZSZ | 1955 | China:Fujian | CSF | 3 | JN381862 |
Muar | 1952 | Malaysia | Human brain | 5 | HM596272 |
XZ0934 | 2009 | China:Tibet | Culex tritaeniorhynchus | 5 | JF915894 |