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Table 2 Maximum likelihood estimate of substitution matrix, substitution pattern and rates were estimated under the Tamura-Nei (1993) model

From: New insight into HCV E1/E2 region of genotype 4a

 

A

T/U

C

G

A

-

3.48

3.91

16.09

T/U

2.75

-

23.29

3.52

C

2.75

20.73

-

3.52

G

12.56

3.48

3.91

-

  1. Rates of different transitional substitutions are shown in bold and those of transversionsal substitutions are shown in italics.