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Table 3 The homology of 5’-UTR and N pro genes between JSLS12-01 and partial BDV strains

From: Characterization of one sheep border disease virus in China

Virus strain Genotype JSLS12-01
Homology of 5’-UTR gene (%) Homology of N pro gene (%)
X818 BDV-1 82.5 64.1
BD31 BDV-1 82.6 63.7
137/4 BDV-1 85.7 66.3
Casimir BDV-2 84.1 -
Rudolph BDV-2 84.1 -
Gifhorn BDV 3 87.7 73.2
AH12-01 BDV-3 83.5 75.8
AH12-02 BDV-3 78.6 73.2
JS12-04 BDV-3 94.4 80.7
90-F-6338 BDV-3 87.4 75.0
90-F-6227 BDV-3 89.0 74.6
BU-1CRA22 BDV-4 85.1 64.4
ZA1-1115 BDV-4 83.2 -
Chamois BDV-4 76.4 -
LE31C2 BDV-4 79.3 -
85-F-488 BDV-5 84.2 70.1
93-F-7289 BDV-5 85.0 70.5
91-F-7014 BDV-6 86.7 68.1
92-F-7119 BDV-6 86.7 68.5
Burdur/05-TR BDV-7 72.9 54.7
Aydin/04-TR BDV-7 71.5 55.7
SN1T BDV Tunisian 72.6 53.7
33S BDV Tunisian 70.5 53.7
SN2T BDV Tunisian 71.3 53.9
  1. -: The sequence could not be obtained in GenBank.