Table 3 The homology of 5’-UTR and N pro genes between JSLS12-01 and partial BDV strains
From: Characterization of one sheep border disease virus in China
Virus strain | Genotype | JSLS12-01 | |
|---|---|---|---|
Homology of 5’-UTR gene (%) | Homology of N pro gene (%) | ||
X818 | BDV-1 | 82.5 | 64.1 |
BD31 | BDV-1 | 82.6 | 63.7 |
137/4 | BDV-1 | 85.7 | 66.3 |
Casimir | BDV-2 | 84.1 | - |
Rudolph | BDV-2 | 84.1 | - |
Gifhorn | BDV 3 | 87.7 | 73.2 |
AH12-01 | BDV-3 | 83.5 | 75.8 |
AH12-02 | BDV-3 | 78.6 | 73.2 |
JS12-04 | BDV-3 | 94.4 | 80.7 |
90-F-6338 | BDV-3 | 87.4 | 75.0 |
90-F-6227 | BDV-3 | 89.0 | 74.6 |
BU-1CRA22 | BDV-4 | 85.1 | 64.4 |
ZA1-1115 | BDV-4 | 83.2 | - |
Chamois | BDV-4 | 76.4 | - |
LE31C2 | BDV-4 | 79.3 | - |
85-F-488 | BDV-5 | 84.2 | 70.1 |
93-F-7289 | BDV-5 | 85.0 | 70.5 |
91-F-7014 | BDV-6 | 86.7 | 68.1 |
92-F-7119 | BDV-6 | 86.7 | 68.5 |
Burdur/05-TR | BDV-7 | 72.9 | 54.7 |
Aydin/04-TR | BDV-7 | 71.5 | 55.7 |
SN1T | BDV Tunisian | 72.6 | 53.7 |
33S | BDV Tunisian | 70.5 | 53.7 |
SN2T | BDV Tunisian | 71.3 | 53.9 |