Table 2 The homology of complete coding gene and protein sequence between JSLS12-01 and partial BDV strains
From: Characterization of one sheep border disease virus in China
Virus strain | GenBank accession number | Pestivirus species | JSLS12-01 | |
|---|---|---|---|---|
Homology of complete coding gene (%) | Homology of protein (%) | |||
FNK2012-1 | AB897785 | BDV-1 | 77.5 | 86.4 |
BD31 | U70263 | BDV-1 | 77.0 | 85.6 |
X818 | AF037405 | BDV-1 | 76.9 | 85.5 |
Reindeer-1 | AF144618 | BDV-2 | 77.3 | 86.5 |
Gifhorn | KF925348 | BDV-3 | 80.3 | 89.9 |
H2121 | GU270877 | BDV-4 | 77.5 | 87.2 |
Aveyron | KF918753 | BDV-5 | 77.6 | 87.0 |
Aydin/04-TR | JX428945 | BDV-7 | 72.2 | 80.1 |
HCLV | AF091507 | CSFV | 71.0 | 78.5 |
Shimen | AF092448 | CSFV | 71.2 | 79.0 |
KE9 | EF101530 | BVDV-1 | 67.0 | 72.0 |
6151 | JN380083 | BVDV-1 | 67.2 | 72.6 |
RNV17 | JN380090 | BVDV-2 | 67.4 | 72.3 |
XJ-04 | FJ527854 | BVDV-2 | 66.9 | 71.7 |