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Table 2 The homology of complete coding gene and protein sequence between JSLS12-01 and partial BDV strains

From: Characterization of one sheep border disease virus in China

Virus strain GenBank accession number Pestivirus species JSLS12-01
Homology of complete coding gene (%) Homology of protein (%)
FNK2012-1 AB897785 BDV-1 77.5 86.4
BD31 U70263 BDV-1 77.0 85.6
X818 AF037405 BDV-1 76.9 85.5
Reindeer-1 AF144618 BDV-2 77.3 86.5
Gifhorn KF925348 BDV-3 80.3 89.9
H2121 GU270877 BDV-4 77.5 87.2
Aveyron KF918753 BDV-5 77.6 87.0
Aydin/04-TR JX428945 BDV-7 72.2 80.1
HCLV AF091507 CSFV 71.0 78.5
Shimen AF092448 CSFV 71.2 79.0
KE9 EF101530 BVDV-1 67.0 72.0
6151 JN380083 BVDV-1 67.2 72.6
RNV17 JN380090 BVDV-2 67.4 72.3
XJ-04 FJ527854 BVDV-2 66.9 71.7