Table 2 Identity table of the full length of the NA gene of 10 Ontario H3N2 viruses isolated from swine in 2011-2012 and selected references viruses based on nucleotide sequence
From: Molecular characterization of H3N2 influenza A viruses isolated from Ontario swine in 2011 and 2012
G1-A/sw/ON/114-13/12/H3N2/NA | G1-A/sw/ON/115-2/12/H3N2/NA | G1-A/sw/ON/118-38/12/H3N2/NA | G1-A/sw/ON/120-55/12/H3N2/NA | G2-A/sw/ON/104-25/12/H3N2/NA | G2-A/sw/ON/204-76/12/H3N2/NA | G2-A/sw/ON/105-56/12/H3N2/NA | G2-A/sw/ON/107-22/12/H3N2/NA | G3-A/sw/ON/103-18/11/H3N2/NA | G3-A/sw/ON/11-105317/11/H3/NA | |
|---|---|---|---|---|---|---|---|---|---|---|
G1-A/sw/ON/114-13/12/H3N2/NA | 100 | 99.7 | 99.9 | 99.9 | 98.5 | 98.6 | 98.6 | 98.6 | 96 | 96 |
G1-A/sw/ON/115-2/12/H3N2/NA | 99.7 | 100 | 99.9 | 99.9 | 98.8 | 98.9 | 98.9 | 98.9 | 96.1 | 96.2 |
G1-A/sw/ON/118-38/12/H3N2/NA | 99.9 | 99.9 | 100 | 100 | 98.7 | 98.7 | 98.7 | 98.7 | 96 | 96 |
G1-A/sw/ON/120-55/12/H3N2/NA | 99.9 | 99.9 | 100 | 100 | 98.7 | 98.7 | 98.7 | 98.7 | 96 | 96 |
G2-A/sw/ON/104-25/12/H3N2/NA | 98.5 | 98.8 | 98.7 | 98.7 | 100 | 99.9 | 99.9 | 99.9 | 96.3 | 96.4 |
G2-A/sw/ON/204-76/12/H3N2/NA | 98.6 | 98.9 | 98.7 | 98.7 | 99.9 | 100 | 100 | 100 | 96.4 | 96.5 |
G2-A/sw/ON/105-56/12/H3N2/NA | 98.6 | 98.9 | 98.7 | 98.7 | 99.9 | 100 | 100 | 100 | 96.4 | 96.5 |
G2-A/sw/ON/107-22/12/H3N2/NA | 98.6 | 98.9 | 98.7 | 98.7 | 99.9 | 100 | 100 | 100 | 96.4 | 96.5 |
G3-A/sw/ON/103-18/11/H3N2/NA | 96 | 96.1 | 96 | 96 | 96.3 | 96.4 | 96.4 | 96.4 | 100 | 99.9 |
G3-A/sw/ON/11-105317/11/H3N2/NA | 96 | 96.2 | 96 | 96 | 96.4 | 96.5 | 96.5 | 96.5 | 99.9 | 100 |
TK/ON/31232/05/H3N2/NA/IV | 97.5 | 97.7 | 97.5 | 97.5 | 98 | 98.1 | 98.1 | 98.1 | 98 | 98.1 |
ON/33853/05/H3N2/NA/IV | 97.7 | 97.8 | 97.7 | 97.7 | 98.2 | 98.2 | 98.2 | 98.2 | 98 | 98.1 |
QC/1698-4/09/H3N2/NA/IV | 96.2 | 96.3 | 96.2 | 96.2 | 96.7 | 96.7 | 96.7 | 96.7 | 96.9 | 97 |
QC/382/09/H3N2/NA/IV | 96.5 | 96.7 | 96.5 | 96.5 | 97 | 97.1 | 97.1 | 97.1 | 97.3 | 97.4 |
QC/1257777/2010/H3N2/NA | 96.2 | 96.4 | 96.2 | 96.2 | 96.9 | 97 | 97 | 97 | 96.9 | 97 |
QC/1267566/2010/H3N2/NA | 95.6 | 95.7 | 95.6 | 95.6 | 96.1 | 96.2 | 96.2 | 96.2 | 97 | 97 |
QC/1267568/2010/H3N2/NA | 95.3 | 95.5 | 95.3 | 95.3 | 95.8 | 95.9 | 95.9 | 95.9 | 96.2 | 96.2 |
TK/ON/FAV9/2011/H3N2/NA | 98.3 | 98.6 | 98.4 | 98.4 | 99.4 | 99.4 | 99.4 | 99.4 | 96.1 | 96.2 |
TK/ON/FAV10/2011/H3N2/NA | 98.4 | 98.7 | 98.6 | 98.6 | 99.5 | 99.6 | 99.6 | 99.6 | 96.3 | 96.3 |
QC/1262080/2010/H3N2/NA | 95.5 | 95.6 | 95.5 | 95.5 | 96 | 96 | 96 | 96 | 95.5 | 95.6 |
QC/1257774/2010/H3N2/NA | 95.3 | 95.5 | 95.3 | 95.3 | 95.8 | 95.9 | 95.9 | 95.9 | 95.7 | 95.7 |
QC/1265553/2010/H3N2/NA | 95.4 | 95.5 | 95.4 | 95.4 | 95.9 | 96 | 96 | 96 | 95.5 | 95.5 |
BC/28103/05/H3N2/NA/IV | 97.5 | 97.7 | 97.5 | 97.5 | 98 | 98.1 | 98.1 | 98.1 | 97.9 | 97.9 |
MN/12707/05/H3N2/NA/IV | 96.9 | 97 | 96.9 | 96.9 | 97.4 | 97.4 | 97.4 | 97.4 | 97.2 | 97.3 |
AB/14722/05/H3N2/NA/IV | 96.7 | 96.8 | 96.7 | 96.7 | 97.2 | 97.2 | 97.2 | 97.2 | 97 | 97.1 |
OK/18717/99/H3N2/NA/III | 93.8 | 93.9 | 93.8 | 93.8 | 94.1 | 94.2 | 94.2 | 94.2 | 94.2 | 94.3 |
IL/21587/99/H3N2/NA/III | 93.7 | 93.8 | 93.7 | 93.7 | 94 | 94.1 | 94.1 | 94.1 | 94.1 | 94.2 |
WI/14094/99/H3N2/NA/III | 93.7 | 93.9 | 93.7 | 93.7 | 94.1 | 94.1 | 94.1 | 94.1 | 94.1 | 94.2 |
OK/18089/99/H3N2/NA/III | 93.8 | 93.9 | 93.8 | 93.8 | 94.1 | 94.2 | 94.2 | 94.2 | 94.2 | 94.3 |
NC/16497/99/H3N2/NA/I | 93.5 | 93.8 | 93.7 | 93.7 | 94 | 94.1 | 94.1 | 94.1 | 93.9 | 94 |
TX/4199-2/98 | 93.7 | 93.9 | 93.7 | 93.7 | 94.1 | 94.2 | 94.2 | 94.2 | 94.2 | 94.2 |
IA/8548-1/98/H3N2/NA/I | 93.4 | 93.6 | 93.4 | 93.4 | 93.8 | 93.9 | 93.9 | 93.9 | 93.9 | 94 |
CO/23619/99/H3N2/NA/II | 93.7 | 93.9 | 93.7 | 93.7 | 94.2 | 94.3 | 94.3 | 94.3 | 94.3 | 94.4 |
NY/150/2000/H3N2/NA/II | 94.5 | 94.7 | 94.5 | 94.5 | 95 | 95.1 | 95.1 | 95.1 | 95 | 95.1 |