Skip to main content

Table 2 miRNA homologs expressed by AHV-1 and MDV-1

From: Computational identification of microRNAs in Anatid herpesvirus 1 genome

Name miRNA sequencea No. of identical nt/total
in seed region (nt positions 2–8)
AHV-1-pre-miR-7 -CAUGGGAA CAUU-UAACACCCC
GCAUGGAA ACGUCCUGGGAAA- -
* * * * * †* * * † * † * † † *
5/7
MDV-1-miR-M13  
AHV-1-pre-miR-9 UAUGUUUU GCCCGGGCAAAUG-UCUGUUGU UCCGUAGUGUUCUC
* * * * * * * * † * † † †
5/7
MDV-1-miR-M6-5p   
  1. a Sequences of orthologous miRNAs expressed by AHV-1 and MDV-1 aligned using ClustalW2. The seed sequences are shown in boldface. Identical nucleotides and nucleotides with conserved target binding potential are indicated with * and †, respectively.