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Table 5 Relative abundance of dinucleotides in PCV

From: Patterns and influencing factor of synonymous codon usage in porcine circovirus

  

Relative abundance of the 16 dinucleotides

 

AA

AU

AG

AC

UU

UG

UC

UA

Mean ± SDa

0.924 ± 0.053

0.870 ± 0.032

1.045 ± 0.029

0.905 ± 0.085

0.881 ± 0.043

1.059 ± 0.037

0.852 ± 0.063

0.826 ± 0.028

 

GG

GC

GA

GU

CC

CA

CU

CG

Mean ± SDa

0.887 ± 0.042

0.927 ± 0.044

0.890 ± 0.027

0.887 ± 0.033

1.105 ± 0.056

1.046 ± 0.097

1.051 ± 0.029

0.622 ± 0.029

  1. a Mean values of 28 PCV genomes relative dinucleotide ratios ± standard deviation.