From: Patterns and influencing factor of synonymous codon usage in porcine circovirus
No | A% | U% | G% | C% | A3% | U3% | G3% | C3% | GC% | GC3% | ENC | Gravy | Aromo |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 24.56 | 27.00 | 28.99 | 19.44 | 28.32 | 27.50 | 23.40 | 20.01 | 48.44 | 43.41 | 55.76 | -0.233824 | 0.134191 |
2 | 24.45 | 26.95 | 28.88 | 19.73 | 27.47 | 28.00 | 25.10 | 20.00 | 48.61 | 45.10 | 56.45 | -0.107513 | 0.109123 |
3 | 24.50 | 26.83 | 28.94 | 19.74 | 28.49 | 27.10 | 23.20 | 20.00 | 48.66 | 43.20 | 56.13 | -0.239154 | 0.134191 |
4 | 24.39 | 26.78 | 28.99 | 19.84 | 19.79 | 31.20 | 28.50 | 20.00 | 48.83 | 48.50 | 56.52 | -0.18045 | 0.107266 |
5 | 24.45 | 26.89 | 28.94 | 19.73 | 28.49 | 27.30 | 23.20 | 20.02 | 48.66 | 43.22 | 55.74 | -0.246507 | 0.130515 |
6 | 24.45 | 27.00 | 28.99 | 19.56 | 28.15 | 27.50 | 23.40 | 20.00 | 48.55 | 43.40 | 56.21 | -0.239338 | 0.134191 |
7 | 24.56 | 26.89 | 28.99 | 19.56 | 28.32 | 27.50 | 23.40 | 20.01 | 48.49 | 43.41 | 56.3 | -0.230092 | 0.13211 |
8 | 24.45 | 27.06 | 28.94 | 19.56 | 28.15 | 27.50 | 23.40 | 20.01 | 48.49 | 43.41 | 55.97 | -0.221771 | 0.132841 |
9 | 24.50 | 26.89 | 28.99 | 19.61 | 19.96 | 31.60 | 28.20 | 20.00 | 48.61 | 48.20 | 56.16 | -0.184256 | 0.108997 |
10 | 25.57 | 25.90 | 28.11 | 20.24 | 26.48 | 24.60 | 27.70 | 20.00 | 48.53 | 47.70 | 57.36 | -0.188909 | 0.100179 |
11 | 25.62 | 25.90 | 28.00 | 20.84 | 24.44 | 25.00 | 28.90 | 20.00 | 48.47 | 48.90 | 56.87 | 0.097557 | 0.08377 |
12 | 25.30 | 25.98 | 28.35 | 20.32 | 25.00 | 25.00 | 28.90 | 20.00 | 48.67 | 48.90 | 57.64 | 0.102817 | 0.09507 |
13 | 25.85 | 25.57 | 28.45 | 20.14 | 24.95 | 24.80 | 28.90 | 20.05 | 48.59 | 48.95 | 57.18 | 0.055789 | 0.091228 |
14 | 25.51 | 26.07 | 28.00 | 20.42 | 26.48 | 24.40 | 27.80 | 20.00 | 48.42 | 47.80 | 57.33 | -0.173298 | 0.098566 |
15 | 25.57 | 25.96 | 28.05 | 20.42 | 25.97 | 26.10 | 29.50 | 20.00 | 48.47 | 49.50 | 57.37 | -0.1475 | 0.089286 |
16 | 25.57 | 26.07 | 28.00 | 20.36 | 26.65 | 24.40 | 27.80 | 20.00 | 48.36 | 47.80 | 57.8 | -0.175269 | 0.102151 |
17 | 25.51 | 25.96 | 28.11 | 20.24 | 28.18 | 22.20 | 31.40 | 20.00 | 48.53 | 51.40 | 55.32 | -0.247464 | 0.119565 |
18 | 25.57 | 26.19 | 27.94 | 20.31 | 32.42 | 25.50 | 28.40 | 20.00 | 48.25 | 48.40 | 56.1 | 0.119264 | 0.085814 |
19 | 25.53 | 26.12 | 28.62 | 20.36 | 28.35 | 22.10 | 31.20 | 20.02 | 48.42 | 51.22 | 55.53 | -0.219601 | 0.117967 |
20 | 25.92 | 25.30 | 27.50 | 21.28 | 25.29 | 25.0 | 27.80 | 20.00 | 48.78 | 47.80 | 58.67 | 0.044658 | 0.084063 |
21 | 25.35 | 25.98 | 28.30 | 20.73 | 24.95 | 25.10 | 22.80 | 20.00 | 48.67 | 42.80 | 57.64 | 0.096485 | 0.093146 |
22 | 25.41 | 25.69 | 28.47 | 20.43 | 24.44 | 25.10 | 29.00 | 20.00 | 48.90 | 49.00 | 57.56 | 0.052539 | 0.087566 |
23 | 25.35 | 26.03 | 28.24 | 20.37 | 24.95 | 25.10 | 28.90 | 20.02 | 48.61 | 48.92 | 57.7 | 0.1 | 0.093146 |
24 | 25.41 | 25.98 | 28.18 | 20.43 | 27.67 | 22.90 | 30.60 | 20.00 | 48.61 | 50.60 | 56.08 | -0.276311 | 0.113924 |
25 | 24.34 | 26.54 | 28.81 | 20.32 | 26.48 | 28.20 | 23.60 | 20.01 | 49.12 | 43.61 | 57.44 | -0.089698 | 0.106572 |
26 | 24.34 | 26.54 | 28.81 | 20.32 | 26.48 | 28.20 | 23.60 | 20.00 | 49.12 | 43.60 | 57.44 | -0.089698 | 0.106572 |
27 | 25.30 | 26.15 | 28.24 | 20.32 | 24.95 | 25.10 | 28.90 | 20.00 | 48.56 | 48.90 | 57.82 | 0.104921 | 0.096661 |
28 | 25.30 | 26.09 | 28.24 | 20.37 | 27.67 | 22.90 | 30.60 | 20.00 | 48.61 | 50.60 | 56.42 | -0.257895 | 0.112523 |