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Table 1 RT-PCR primer and probe sequences

From: Systemic virus distribution and host responses in brain and intestine of chickens infected with low pathogenic or high pathogenic avian influenza virus

Target

gene

Primer/

Probe

Sequence

Accession

no.

FKBP5

Forward primer

5'- CAAAGAGTCATGGGAGATGG - 3'

NM_001005431

 

Reverse primer

5'- ATCAGAGGCTTTCGACTCCT - 3'

 
 

Probe

5'- 6FAM-TCCTGTCCCGCTCGTTGTGC-TMR

 

PER2

Forward primer

5'- TCCCAACTATACGGAGGACA - 3'

NM_204262

 

Reverse primer

5'- AAGTGTTCGTGTGAGCCATT - 3'

 
 

Probe

5'- 6FAM-CACCCCAGTGTTCAGGAGATCACA-TMR

 

STC2

Forward primer

5'- AGGTCTAGCTGCGTTCTGTG - 3'

XM_414534

 

Reverse primer

5'- TGGTTCGAGCTTGTTCTACC - 3'

 
 

Probe

5'- 6FAM-AAGGCTGCCCTGACCCAAGG-TMR

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