Table 1 Alignment of VP2 amino acid (131-155) sequences of EV71 subgenogroups and CAV16
From: Characterization and specificity of the linear epitope of the enterovirus 71 VP2 protein
Genogroup | Strain | GenBank # | Sequence |
|---|---|---|---|
C4 | Fuyang-08 | EU703813.1 | VIGTVAGGTGTEDTHPPYKQTQPGA |
C4 | 75-Yamagata | AB550338.1 | VIGTVAGGTGTEDSHPPYKQTQPGA |
C2 | NUH0075/SIN/08 | FJ172159.1 | VIGTVAGGTGTEDSHPPYKQTQPGA |
B2 | 7423-MS-87 | U22522.1 | VIGTVAGGTGTEDSHPPYKQTQPG |
B4 | 5865/SIN/09 | AF316321.2 | VIGTVAGGTGTEDSHPPYKQTQPGA |
B5 | NUH0083/SIN/08 | FJ461781.1 | VIGTVAGGTGTEDSHPPYKQTQPGA |
A | BrCr | U22521.1 | VIGTVAGGTGTENSHPPYKQTQPGA |
CAV16 | CAV16 | U05876 | VLGTIAGGDGNENSHPPYVTTQPGQ |