Human parainfluenza virus type 2 hemagglutinin-neuramindase gene: sequence and phylogenetic analysis of the Saudi strain Riyadh 105/2009

Table 2 Amino acid differences among the selected HPIV-2 strains as compared to the Saudi strain Riyadh 105/2009

Strain^a	Country/Year	18	48	50	54	57	67	114	139	164	175	195	201	319	332	344	345	351	360	367	376	443	482	571
Riyadh 105/2009^b	Saudi Arabia/2009	K	A	P	N	D	V	T	K	H	S	T	A	S	T	E	R	G	Y	I	Q	H	Q	P
86-391	Japan/2004	R	V	S	D	E	I	A	E	N	I	A	S	T	K	K	Q	S	N	V	H	Y	R	L
76-86	Japan/2004	R	V	S	D	E	I	A	E	N	I	A	S	T	K	K	Q	S	N	V	H	Y	R	L
4-80	Japan/2004	R	V	S	D	E	I	A	E	N	I	A	S	T	K	K	Q	S	N	V	H	Y	R	L
TC-6482	Japan/2004	R	V	S	D	E	I	A	E	N	I	A	S	T	K	K	Q	S	N	V	H	Y	R	L
TC-6558	Japan/2004	R	V	S	D	E	I	A	E	N	I	A	S	T	K	K	Q	S	N	V	H	Y	R	L
62-M786	Japan/2004	R	V	S	D		I			N	I						Q	N	N	V	H	Y
Greer-J1	Japan/2007	R	V	S	D		I			N	I				K		Q	S	N	V	H	Y
Toshiba	Japan/1990	R	V	S	D		I			N	I				K		Q	S	N	V	H	Y
London	UK/1990	R	V	S	D		I			N	I				K		Q	S	N	V	H	Y
Lyon-26056-1997	France/1997	R	V	S	D	E	I	A	E	N	I	A	S	T	K	K	Q	N	N	V	H	Y	R	L
Lyon-18620-2001	France/2001	R	V	S		E	I	A	E		I	A	S	T	K	K	Q	S	N	V	H	Y	R	L
Lyon-20283-2001	France/2001	R	V	S		E	I	A	E		I	A	S	T	K	K	Q	S	N	V	H	Y	R	L
Lyon-20435-2001	France/2001	R	V	S		E	I	A	E		I	A	S	T	K	K	Q	S	N	V	H	Y	R	L
V9412-6	USA/1999	R	V	S		E	I	A	E		I	A	S	T	K	K	Q	S	N	V	H	Y	R	L
Oklahoma-94-2009	USA/2009	R	V	S																		Y
Oklahoma-283-2009	USA/2005	R	V	S		E	I	A	E		I	A	S	T	K	K	Q	S	N	V	H	Y	R	L
Oklahoma-3955-2005	USA/2005	R	V	S	D	E	I	A	E	N	I	A	S	T	K	K	Q	S	N	V	H	Y	R	L

^a Accession numbers of the strains used in analysis –in order– are: Genbank HM460888, AB189949, AB189950, AB189951, AB189952, AB189953, AB189948, AB367954, X57559, D00865, DQ072589, DQ072586, DQ072587, DQ072588, AF213352, JF912194, JF912195, and JF912196.
^b Blank cell indicates an amino acid identical to that of strain Riyadh 105/2009.

ISSN: 1743-422X