Table 2 GenBank accession numbers and abbreviations of Pakistani AIV H5N1 isolates used in this study
Name of isolates | Abbreviations used | HA | NA | M | NP | PA | NS | PB1 | PB2 |
|---|---|---|---|---|---|---|---|---|---|
A/Chicken/Rawalakot/NARC-2441A/06 | Ck/Rlkt/2441/06 | CY037762 | CY037764 | CY037765 | CY037763 | CY037761 | CY037766 | CY037760 | CY037759 |
A/Chicken/Sihala/NARC-3303/06 | Ck/Shla/3303/06 | CY037770 | CY037772 | CY037773 | CY037771 | CY037769 | CY037774 | CY037768 | CY037767 |
A/Chicken/Lahore/NARC-3320/06 | Ck/Lhr/3320/06 | HM208702 | HM208704 | HM208703 | HM208705 | HM208707 | HM208706 | HM208708 | HM208709 |
A/Goose/Lahore-Pakistan/NARC-3321/06 | Gs/Lhr/3321/06 | CY034733 | CY034734 | - | - | - | - | - | - |
A/Peacockk/Manshera-Pak/NARC-7558/07 | Pck/Mnsr/7558/07 | EU401796 | EU401799 | - | - | - | - | - | - |
A/Goose/Islamabad/NARC-7757/07 | Gs/Isb/7757/07 | CY034725 | CY034726 | - | - | - | - | - | - |
A/Turkey/Islamabad-Pak/NARC-7871/07 | Tk/Isb/7871/07 | EU401794 | EU401797 | - | - | - | - | - | - |
A/Turkey/Islamabad/NARC-7873/07 | Tk/Isb/7873/07 | CY034727 | CY034728 | - | - | - | - | - | - |
A/Crow/Peshawar/NARC-7914/07 | Crow/Psh/7914/07 | CY034729 | CY034730 | - | - | - | - | - | - |
A/Peacock/Cahkshahzad/NARC-9238/07 | Pck/Cksz/9238/07 | CY034731 | CY034732 | - | - | - | - | - | - |
A/Chicken/Manshera/NARC-10337/07 | Ck/Mnsr/10337/07 | EU401795 | EU401798 | - | - | - | - | - | - |
A/Chicken/Pakistan-Khi/NARC-520/2008 | Ck/Khi/520/08 | JF827075 | JF827076 | - | - | - | JF827077 | - | - |
A/Chicken/Pakistan-Lhr/NARC-610/2008 | Ck/Lhr/610/08 | JF827078 | JF827079 | - | - | - | JF827080 | - | - |
A/Chicken/Pakistan-Khi/NARC-612/2008 | Ck/Khi/612/08 | JF827081 | JF827082 | - | - | - | JF827083 | - | - |
A/Crow/Pakistan-Khi/NARC-11672/2008 | Crow/Khi/11672/08 | JF827084 | JF827085 | - | - | - | JF827086 | - | - |