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Table 1 Percent nucleotide and amino acid identity of Cro1 strain 780032I with other versiviruses

From: Genetic characterization of a reptilian calicivirus (Cro1)

780032I

genome

NS1

NS2

NS3

NS4

NS5

NS6-7

LC

VP1

VP2

  

nt

aa

nt

aa

nt

aa

nt

aa

nt

aa

nt

aa

nt

aa

nt

aa

nt

aa

VESV A48

82.9

91

87.8/92.6

83.7

90.6/96.9

80.2

91.3/96.6

88.5

95/97.1

78.5

80.5/90.3

86.2

91.7/96

82.7

81.6/88.2

74.6

80.4/87.1

80.2

86.1/93

PAN1

82.5

89.2

87.2/91.2

82.1

89.5/96.5

79.9

91.9/96.9

88.1

93.6/96.4

85

95.6/98.2

83.9

90.8/95.6

85.6

81.6/90.1

75.2

82.6/89.6

81.6

85.2/89.6

v1415

82.1

84.2

79.7/83.1

80.3

89.2/95.8

80.8

93.8/98

88.3

93.5/96.8

82.3

93.8/99.1

82.7

93.5/97.6

84.2

89.5/94.7

77

84.9/90.5

81.3

85.2/90.4

v810

82.5

86

80.4/87.8

78.4

88.5/94.8

80

92.4/97.2

87

94.6/97.5

83.2

95.6/100

82.8

93.1/97.7

87.1

89.5/94.1

78.9

85.3/91

84.8

89.6/92.2

SMSV1

79.2

88.3

85.8/89.2

81.6

87.5/95.1

80.1

90.4/96.9

89.5

94.3/97.1

83.5

94.7/100

84.4

91.5/96.4

80.7

83.6/89.5

64.5

67.2/80.4

68.4

68.7/80.9

WCV

78.9

89

85.1/90.5

80.6

88.9/95.8

79.8

92.1/97.5

87

92.1/96.1

84.1

93.8/100

85.9

92.4/97

81.4

82.9/90.8

63.9

66/80.1

67

73.9/83.5

RaV

79.2

92.1

88.5/90.5

82

89.5/95.8

80.4

91.3/97.2

86.4

92.5/95.3

82.9

90.3/98.2

86

93.1/97.3

78.3

81.6/86.8

63.6

66.1/79.9

65.5

71.3/81.7

CaCV

49.7

29.7

7.4/22.2

54.1

46.9/65.4

57.9

57.9/75

55.2

51.9/66.6

49.3

40.7/65.9

58.3

56.9/71.1

41.6

30.6/43.1

46.1

38.6/52.7

32.9

29.4/40.4

GCV8

51.2

38.1

6.1/19.6

53.1

46.2/65.1

59.6

57.3/75.8

55.9

52.6/67.7

50.9

39.8/63.4

60.3

60.3/74.7

45.5

27.5/40

46.2

38/54

31.4

26.5/38.2

ACV8

50.7

38.3

6.7/20.1

53.8

46.9/65.4

59.5

57.6/75.8

56.4

51.9/67.7

52

39.8/63.4

59

60.3/74.6

44.1

26.9/39.4

45.8

38.5/54.9

31

26.5/38.2

ACV9

50.5

38.5

6.7/20.1

53.1

46.6/65.4

59.6

57.6/75.8

56.2

52.3/67.7

52

39.8/63.4

59

60.3/74.6

43.7

26.9/39.4

45.8

38.5/54.7

30.7

26.5/38.2

FCVURB

52.2

12.8

4.1/8.8

55.2

48.6/68.1

62.2

63.2/79.8

55.6

51.1/70

57.3

58.8/71.1

58.2

59.1/74.9

32.5

19/30.7

53.7

50.6/67.9

41.7

20/37.4

FCVF65

51.6

12.6

4.7/8.8

54.2

45.8/65.3

61.6

59.8/76.7

56.1

50/68.9

56.1

56.1/68.4

57.6

58.2/73.5

30.8

19/30.1

52.9

49.6/66.8

40.9

20/37.4

FCVF4

52.6

13.2

4.1/8.8

53.6

47.2/67.4

63.9

63.8/79.5

56.4

51.1/69.6

56.7

57.9/69.3

58.8

58.7/74.6

31.9

19.6/30.7

54.3

51.2/67

40.9

20.9/38.3

FCVF9

51.6

13

4.1/8.8

53

47.2/66.7

61.5

64.3/79.5

56.2

51.8/70.4

54.4

56.1/71.1

57.9

58.8/74.9

33

18.3/30.1

53.7

51.2/67.7

39.4

20/36.5

  1. Relatedness of amino acid sequences are shown as percent identity/percent similarity.