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Table 2 Primers and vectors used to generate WNV recombinant proteins

From: West Nile alternative open reading frame (N-NS4B/WARF4) is produced in infected West Nile Virus (WNV) cells and induces humoral response in WNV infected individuals

Name

Position AF260967

Primer forward

Primer reverse

Vector

WARF4

7310-7757

5-atggcggatcc aggcaatgcgctcagcccagcg-3 BamHI

5- tctttgaagctt ctagtgaactcttcttttgtc-3 HindIII

pRSET B

ENV

1852-2198

5- ggaaaggatcc agttgaagggaacaacc -3 BamHI

5-ctcctgaattc gtggttgtaaaggctttgcc-3 EcoRI

pRSET C

preM/M

464-968

5-cagcgggatcc cagttaccctctctaacttcc-3 BamHI

5-caagggaattc aagctgtaagctggggccacc-3 EcoRI

pRSET C

Partial NS5

9015-9645

5-gaggcggatcc gcggggggaatgtcacac-3 BamHI

5-ttccgaattc tcaaacagccaggtcctg-3EcoRI

pRSET B

Partial NS4B

7276-7680

5-tcgatggatcc gacactatgcctacatggttcc-3BamHI

5-ggatcaagctt ttatctttttagtcctggtttttc-3HindIII

pRSET C

  1. The table shows the primers and vectors used for molecular cloning. The restriction sites are underlined. Because of BamHI restriction site generated by a T/C transition in position 850 [AF260967], the preM/M cloned fragment encompassed the positions 464–850.