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Table 1 Benefits and weaknesses of the molecular methods for HPV detection

From: A review of methods for detect human Papillomavirusinfection

Method

Benefits

Weaknesses

Nucleic acids hybridization assays

Southern blot is gold standard for HPV genomic analysis Presence of HPV in association with morphology

Low sensitivity , time consuming, relatively large amounts of purified DNA

  

Southern blot and hybridization cannot use degraded DNA

Signal amplification assays

Quantitative

Licensed and patented technologies

 

FDA-approved test (hc2)

Wasn’t designed to genotyping individual

 

Lower false-positive rate

 
 

High sensitivity to genotyping

 

Nucleic acids amplification assays

Flexible technology (viral load and genotype)

Lower amplification signals of some HPV genotypes

 

Very high sensitivity

Contamination with previously amplified material can lead to false positives

 

Multiplex analysis

 
  1. HPV = Human Papillomavirus; FDA = Food and Drug Administration; hc2 = Hybrid Capture® 2; PCR = Polymerase Chain Reaction.