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Figure 3 | Virology Journal

Figure 3

From: Transcript mapping of Cotton leaf curl Burewala virusand its cognate betasatellite, Cotton leaf curl Multan betasatellite

Figure 3

Mapping the 5′ends of CLCuBuV C1 and C4 gene transcripts. The nucleotide sequence of CLCuBuV between coordinates 2413–133 is shown. The beginning of genes C1 and C4 are indicated by the start codon (ATG; highlighted in pink). The predicted amino acid sequence of the C1 and C4 proteins are shown in blue and red text, respectively. The putative promoter TATA elements and CAAT boxes are highlighted with purple and green boxes, respectively. The position of independent RACE clone ends mapping to the 5′ termini are indicated with arrows and by their coordinates. The numbers of cDNA clones sequenced for each end are indicated in brackets. The conserved, between geminiviruses, nonanucleotide sequence (TAATATTAC) is highlighted with a large pink box. The two internal methionine codons (highlighted in orange) of the C4 gene are discussed in the text. Nucleotide numbering is according to [21].

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Virology Journal

ISSN: 1743-422X