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Table 2 Percent nucleotide sequence diversity of the partial B2L gene between 35 Parapoxvirus strains

From: Phylogenetic analysis of strains of Orf virus isolated from two outbreaks of the disease in sheep in Greece

 

Strain no.

Strain no.-GenBank accession no.

1

2

3

4

5

6

7

8

9

10

11

12

13

14

15

16

17

18

19

20

21

22

23

24

25

26

27

28

29

30

31

32

33

34

35

01-HQ215589

                                   

02-JN368482

0.4

                                  

03-HQ215588

1.6

1.2

                                 

04-FJ808074

2.7

3.1

2.7

                                

05-DQ263305

2.3

2.7

2.3

1

                               

06-AY424973

18.3

18.3

18.3

19.1

18.6

                              

07-AY424972

5.4

5.4

5

4.6

3.9

18.3

                             

08-EU935106

1.2

1.6

0.8

2.3

1.8

18.1

5

                            

09-GU320351

1.6

1.6

0.8

2.7

2.3

18.3

5

0.8

                           

10-FJ665819

1.4

1.4

0.6

2

1.6

17.6

4.3

0.6

0.6

                          

11-EU327506

1.2

1.2

0.8

2.3

1.8

17.6

4.6

0.8

0.8

0.2

                         

12-FJ665818

0.6

1

1.4

2.5

2

18.3

5.2

1

1.4

1.2

1

                        

13-AY278209

0.8

1.2

1.6

2.2

1.8

18.3

5

1.2

1.6

1.4

1.2

0.6

                       

14-JN368483

1

1

0.6

2.5

2

17.8

4.8

0.6

0.6

0.4

0.6

1.2

1.4

                      

15-GQ328006

1.6

1.6

1.2

2.7

2.2

17.8

5

1.2

1.2

0.6

0.4

1.4

1.6

1

                     

16-AY958203

2.5

2.9

2.9

2.5

1.8

19.1

4.6

2.5

2.9

2.3

2

2.3

1.8

2.7

2.5

                    

17-AY453656

6.3

6.3

5.9

5.4

4.8

19.1

1.2

5.9

5.9

5.2

5.4

6.1

5.9

5.6

5.8

5.4

                   

18-AY453667

0.4

0.8

1.2

2.3

1.8

18.1

5

0.8

1.2

1

0.8

0.2

0.4

1

1.2

2

5.9

                  

19-AB521175

0.4

0.8

1.2

2.3

1.8

18.1

5

0.8

1.2

1

0.8

0.2

0.4

1

1.2

2

5.9

0

                 

20-AB189670

0.6

1

1.4

2.5

2

18.3

5.2

1

1.4

1.2

1

0.4

0.6

1.2

1.4

2.3

6.1

0.2

0.2

                

21-JN846834

1.8

1,8

1.8

1.6

1.4

18.3

4.1

1.8

1.8

1.6

1.4

1.6

1.4

1.6

1.8

2

5

1.4

1.4

1.6

               

22-HQ694773

2

2

1.2

3.1

2.7

18.1

5.4

0.8

1.2

1

1.2

1.8

2

1

1.6

3.3

6.3

1.6

1.6

1.8

2.3

              

23-HQ694772

3.7

4.2

4.2

3.5

3.3

20.7

6.1

3.7

4.2

3.5

3.3

3.1

3.3

3.9

3.7

2.3

7

3.3

3.3

3.5

2.7

4.4

             

24-JN088053

0.8

1.2

1.6

2.2

1.8

18.3

5

1.2

1.6

1.4

1.2

0.6

0

1.4

1.6

1.8

5.9

0.4

0.4

0.6

1.4

2

3.3

            

25-JN088052

1.4

1.8

2.2

1.6

1.4

18.6

4.3

1.8

2.2

1.6

1.4

1.2

1

2

1.8

1.2

5.2

1

1

1.2

1.2

2.7

2.3

1

           

26-JN088051

1.4

1.4

0.6

2

1.6

17.6

4.3

0.6

0.6

0

0.2

1.2

1.4

0.4

0.6

2.3

5.2

1

1

1.2

1.6

1

3.5

1.4

1.6

          

27-HQ202153

1.4

1.6

1.2

2.9

2.5

18.9

5.6

0.6

1.4

1.2

1.4

1.6

1.8

1.2

1.8

3.1

6.5

1.4

1.4

1.6

2.5

1.4

4.4

1.8

2.5

1.2

         

28-GU903501

2

2.5

2

0.6

0.4

18.6

3.9

1.6

2

1.4

1.6

1.8

1.6

1.8

2

1.8

4.8

1.6

1.6

1.8

1

2.5

2.9

1.6

1

1.4

2.2

        

29-GU460370

7.4

7.4

6.9

6.5

5.8

20.2

2.4

7

6.9

6.3

6.5

7.2

6.9

6.7

6.9

6.5

2.9

7

7

7.2

6.1

7.4

8.1

6.9

6.3

6.3

7.6

5.8

       

30-HM466933

2.3

2.3

1.8

2

1.6

19.1

4.3

1.8

1.8

1.6

1.8

2

1.8

1.6

2.3

2.7

5.2

1.8

1.8

2

1.2

2.3

3.9

1.8

2

1.6

2.5

1.4

6.3

      

31-AB493826

0.6

1

1.4

2.5

2

18.3

5.2

1

1

1.2

1

0.4

0.6

1.2

1.4

2.2

6.1

0.2

0.2

0.4

1.6

1.8

3.5

0.6

1.2

1.2

1.6

1.8

7.2

2

     

32-AB521170

0.4

0.8

1.2

2.3

1.8

18.1

5

0.8

1.2

1

0.8

0.2

0.4

1

1.2

2

5.9

0

0

0.2

1.4

1.6

3.3

0.4

1

1

1.4

1.6

7

1.8

0.2

    

33-HQ239073

0.8

1.2

1.4

2.7

2.3

18.6

5.4

1.2

1.6

1.4

1.2

0.6

0.8

1.4

1.6

2.5

6.3

0.4

0.4

0.6

1.8

2

3.7

0.8

1.4

1.4

1.8

2

7.4

2.3

0.6

0.4

   

34-HQ239072

0.2

0.6

1.4

2.5

2

18.3

5.2

1

1.4

1.2

1

0.4

0.6

1.2

1.4

2.3

6.1

0.2

0.2

0.4

1.6

1.8

3.5

0.6

1.2

1.2

1.2

1.8

7.2

2

0.4

0.2

0.6

  

35-OVU06671

1.4

1.8

2.2

1.6

1.4

18.6

4.3

1.8

2.2

1.6

1.4

1.2

1

2

1.8

1.2

5.2

1

1

1.2

1.2

2.7

2.3

1

0

1.6

2.5

1

6.3

2

1.2

1

1.4

1.2

 
  1. Strains 1-5 & 8-35: Orf virus, strain 6: Bovine papular stomatitis virus, strain 7: Pseudocowpox virus