Phylogenetic analysis of strains of Orf virus isolated from two outbreaks of the disease in sheep in Greece

Billinis, Charalambos; Mavrogianni, Vasia S; Spyrou, Vasiliki; Fthenakis, George C

doi:10.1186/1743-422X-9-24

Virology Journal

Table 1 Information about Parapoxvirus strains (n = 35) used for phylogenetic analysis

From: Phylogenetic analysis of strains of Orf virus isolated from two outbreaks of the disease in sheep in Greece

No	Strain identification	Animal species infected	Country of origin	GenBank accession no.	Reference
1	Cro-Cres-12446/09	Sheep	Croatia	HQ215589	[10]
2	Vaccine strain	Goat	USA	AY278209	[11]
3	Ena	Serow	Japan	AB521175	[6]
4	NZ2/2004	Sheep	New Zealand	AY453667	[12]
5	His	Sheep	Japan	AB189670	[13]
6	MTO5	Sheep	Brazil	FJ665818	[7]
7	Hoping	Goat	Taiwan	EU935106	[14]
8	Cro-Goat-11727/10	Goat	Croatia	HQ215588	[10]
9	Hub/2009	Goat	China	GU320351	[9]
10	GRE-1 genital 2003	Sheep	Greece	JN368482	Present study
11	GRE-2 teat 2004	Sheep	Greece	JN368483	Present study
12	NE1	Goat	Brazil	FJ665819	[7]
13	Taiping	Goat	Taiwan	EU327506	[14]
14	ORFV/2009/Korea	Goat	Korea	GQ328006	[8]
15	[unidentified]	[unknown]	Iran	AY958203*	[Ghorashi et al. (unpublished)]
16	Jilin	Sheep	China	FJ808074	[15]
17	India 67/04	Sheep	India	DQ263305	[16]
18	Pseudocowpox virus strain	Cattle	-	AY424972	[11]
19	F00.120R	Reindeer	Finland	AY453656	[12]
20	Bovine papular stomatitis virus strain	Cattle	-	AY424973	[11]
21	Assam09	Goat	India	JN846834*	[Bora et al. (unpublished)]
22	ORFV/LiaoNing/2010/China	Goat	China	HQ694773*	[Zhang et al. (unpublished)]
23	ORFV/GanSu/2009/China	Sheep	China	HQ694772*	[Zhang et al. (unpublished)]
24	Isolate A	Goat	Brasil	JN088053*	[Abrahao et al. (unpublished)]
25	Isolate D	Sheep	Brasil	JN088052*	[Abrahao et al. (unpublished)]
26	Isolate A	Goat	Brasil	JN088051*	[Abrahao et al. (unpublished)]
27	Shanxi	Goat	China	HQ202153*	[Shi (unpublished)]
28	JS04	Sheep	China	GU903501	[17]
29	Cam/09	Camel	India	GU460370*	[Venkatesan et al. (unpublished)]
30	Muk/2000	Goat	India	HM466933*	[Venkatesan et al. (unpublished)]
31	GE	Serow	Japan	AB493826	[18]
32	Asahi	Serow	Japan	AB521170	[19]
33	485/09	Chamois	Italy	HQ239073*	[Scagliarini et al. (unpublished)]
34	378/08	Mountain goat	Italy	HQ239072*	[Scagliarini et al. (unpublished)]
35	NZ-2/1994	Sheep	New Zealand	OVU06671	[5]

Strains 1-17, 19 & 21-35: Orf virus, *: information regarding this strain drawn through GenBank accession no.

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ISSN: 1743-422X

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