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Table 1 Sequences of primers used for the PCRs

From: Characterization of sequence elements from Malvastrum yellow vein betasatellite regulating promoter activity and DNA replication

Primers

Sequences (5'-3')

Underlined restriction site

Position on MYVB

Y47βp138-F

GAATTCAAGCTTCTCCATCATATCTTTAAAGT

EcoRI, HindIII

690-671

Y47βp214-F

GAATTCAAGCTTCTCATGTGTACGTATATATACG

EcoRI, HindIII

766-745

Y47βp267-F

GAATTCAAGCTTCGTTTTCTTTCCTTTTCAGTTCAG

EcoRI, HindIII

819-796

Y47βp389-F

GAATTCAAGCTTCAAACGACATCGTTTTCGAGTT

EcoRI, HindIII

941-920

Y47βp418-F

GAATTCAAGCTTTTATTATTTTTTTCTTTTTTTCTTC

EcoRI, HindIII

971-947

Y47βp-F

GAATTCAAGCTTTTTCAAATAACAGATCATCAAG

EcoRI, HindIII

195-174

Y47βp-R

GAGCTCGGATCCCTTGCTTGTGTGATGGAAGTG

SacI, BamHI

553-573

Y47βΔUTR-F

TTTTCTTTTTCTCAAACGACATCGTTTTCG

962-953 plus 943-924

Y47βΔUTR-R

GTCGTTTGAGAAAAAGAAAAAAATAATAATGGGG

934-943 plus 953-976

β01

GTAGGTACCACTACGCTACGCAGCAGCC

KpnI

1290-1308

β02

AGTGGTACCTACCCTCCCAGGGGTACAC

KpnI

1283-1265

β03

GTAGAAACCACTACGCTACGCAGCAGCC

1290-1308