Oligo name | Note | Sequence (5′ – 3′) |
---|---|---|
MDS-4 | Reverse transcription | CGCTCTTCCGATCTNNNNNN |
MDS-189 | Library amplification | CTGTCTGGCTCTTCCGATCT |
MDS-115 | Degenerate astrovirus consensus | CCATCAGGTCARWWNTCAACAAC |
MDS-116 | Degenerate astrovirus consensus | CTCGCTAATHTAYGGDGATGA |
MDS-117 | Degenerate astrovirus consensus | GGTTTNACCCACATNCCAAA |
MDS-118 | Degenerate astrovirus consensus | GTCCAACTGTGADNCCACARAA |
MDS-119 | Rabbit astrovirus diagnostic | ATAATAACATGGTCAACTATTGGCTTC |
MDS-120 | Rabbit astrovirus diagnostic | GACATCCTTATACATTTTCACAACTTT |
MDS-156 | Vertebrate rRNA (L2513) | GCCTGTTTACCAAAAACATCAC |
MDS-157 | Vertebrate rRNA (H2714) | CTCCATAGGGTCTTCTCGTCTT |
MDS-298 | Genome recovery and sequencing (27–46 forward) | CGGCCAGAGAGCCTATTACC |
MDS-296 | 5′ RACE (149–168 reverse) | GGCTAGAGGAATGGGGTCAG |
MDS-299 | Genome recovery and sequencing (1146–1165 forward) | GCTCGTTCCGATAATTGCTC |
MDS-300 | Genome recovery and sequencing (1229–1248 reverse) | GCAACTAACCACGCACAATG |
MDS-144 | Genome recovery and sequencing (2554–2564 forward) | TCTGGACYGARGARGARTA |
MDS-300 | Genome recovery and sequencing (2639–2659 reverse) | CACTCCATTCAGGGTAACCAA |
MDS-135 | Genome recovery and sequencing (3573–3592 forward) | TCCACTCCCGCCTACCCCAA |
MDS-145 | Genome recovery and sequencing (3622–3641 reverse) | CCACCCACAATCAGAGAGGT |
MDS-119 | Genome recovery and sequencing (4165–4191 forward) | ATAATAACATGGTCAACTATTGGCTTC |
MDS-125 | Genome recovery and sequencing (4287–4308 reverse) | CATAATCAGATGGGAGGACAGG |
MDS-147 | Genome recovery and sequencing (4602–4620 forward) | CTTCGCAGCCACTCTCTTG |
MDS-137 | Genome recovery and sequencing (4668–4683 reverse) | TTGGTCCTCCCCTCCA |
MDS-138 | 3′ RACE (5719–5729 forward) | TGGTGGTTTGT |
MDS-150 | Genome recovery and sequencing (5759–5779 reverse) | TCTGAAATTGCACTGTGTTGG |
MDS-121 | RACE oligo-dT primer | CCAGTGAGCAGAGTGACGAGGACTCGAGCTCAAGCT17 |
MDS-122 | RACE outer adapter primer | CCAGTGAGCAGAGTGACG |
MDS-123 | RACE inner adapter primer | GAGGACTCGAGCTCAAGC |