Skip to main content

Table 2 HPV16 L1-derived peptides used in this study and their binding motifs to HLA-A2 and -A24

From: Identification of B cell epitopes reactive to human papillomavirus type-16L1- derived peptides

 

DR

A2

4A2

 

position

Amino acid sequence

position

Amino acid sequence

Score

position

Amino acid sequence

Score

Peptide 1

54-73

KPNNNKILVPKVSGLQYRVF

60-68

ILVPKVSGL

30

59-68

KILVPKVSGL

14

Peptide 2

392-422

HSMNSTILEDWNFGLQPPPGG

398-406

ILEDWNFGL

23

397-406

TILEDWNFGL

16

Peptide 3

62-81

VPKVSGLQYRVFRIHLPDPN

67-75

GLQYRVFRI

22

66-75

SGLQYRVFRI

24

Peptide 4

112-131

PLGVGISGHPLLNKLDDTEN

118-126

SGHPLLNKL

22

117-126

ISGHPLLNKL

12

Peptide 5

243-262

GDSLFFYLRREQMFVRHLFN

249-257

YLRREQMFV

22

248-257

FYLRREQMFV

12

Peptide 6

300-319

VTSDAQIFNKPYWLQRAQGH

305-313

QIFNKPYWL

21

305-313

QIFNKPYWL

12

Peptide 7

144-162

RECISMDYKQTQLCLIGCK

148-156

SMDYKQTQL

20

148-156

SMDYKQTQL

11

Peptide 8

293-312

PTPSGSMVTSDAQIFNKPYW

298-306

SMVTSDAQI

20

298-306

SMVTSDAQI

10

Peptide 9

384-403

TADVMTYIHSMNSTILEDWN

390-399

YIHSMNSTIL

20

389-398

TYIHSMNSTI

23

Peptide 10

152-171

KQTQLCLIGCKPPIGEHWG

157-165

CLIGCKPPI

23

156-165

LCLIGCKPPI

12

  1. Anchor residues for HLA class I are shown in boldface.