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Table 1 Viral hits of the 454 reads after assembly and blastn/x searches

From: Viral metagenomic analysis of bushpigs (Potamochoerus larvatus) in Uganda identifies novel variants of Porcine parvovirus 4 and Torque teno sus virus 1 and 2

Virus hit

Blastn identity

Blastxidentity

TTSuV-1

75 - 83%

48 - 75%

TTSuV-2

68 - 85%

40 - 86%

PPV4

No hit - 72%

40 - 76%

GB Hepatitis C virus

No hit

33%

Sclerotinia hypovirulence associated virus

78%

71%

Porcine endogenous retrovirus

80 - 95%

86 - 89%

  1. The table shows the sequence similarity that the 454 reads, identified as viral sequences through blastn and blastx searches, had to best available hit in GenBank.