Figure 3From: Molecular characterization of totiviruses in Xanthophyllomyces dendrorhousPseudoknot structure prediction. The predictions were performed using a novel pseudoknot detection method called DotKnot (http://dotknot.csse.uwa.edu.au/) [56, 57]. For the prediction of the estimated free energy (EFE), the method uses the pseudoknot loop entropy parameters published by Cao and Chen [58, 59]. The putative slippery sites are indicated in the boxed region.Back to article page