Skip to main content

Table 2 Nucleotide and amino acid variations of E1 gene in Delhi samples in comparison with ECSA lineage and other Indian samples are shown here

From: Genetic characterization of Chikungunya virus from New Delhi reveal emergence of a new molecular signature in Indian isolates

Nucleotide Position

Amino acid variation

Samples

ECSA#

Indian Samples

All Delhi Sample

IND-10-DEL4

IND-10-DEL17

IND-10-DEL48

IND-10-DEL88

IND-10-DEL91

IND-10-DEL100

IND-10-DEL108

10521

 

A

.

.

.

.

.

G

.

.

.

10524

 

C

T/C

T

       

10529*

V179A

T

.

.

.

.

C

.

.

.

.

10545

 

T

C

C

       

10548

 

C

T/C

T

       

10580*

R196K

G

.

.

.

.

.

A

.

.

.

10602

 

C

.

T

C

      

10614

 

G

A/G

A

       

10623

 

C

T/C

T

       

10624*

K211E

A

A/G

G

       

10641

 

C

T/C

T

       

10665

 

G

.

.

.

.

A

.

.

.

.

10689

 

A

A/G

.

.

G

.

.

T

.

.

10693*

S234P

T

.

.

.

.

C

.

.

.

.

10723

 

T

C

C

       

10732*

R247C

C

.

.

.

.

.

.

.

.

T

10734

 

A

C/A

C

       

10743

 

G

A/G

A

       

10746

 

A

G

G

       

10798*

M269V

A

G/A

G

       

10845*

D284E

T

A/T/C

A

       

10848

 

G

.

.

.

.

.

.

.

A

.

10893

 

A

G

G

       
  1. Asterisk next to nucleotide position denotes non-synonymous mutations. Dot represents same nucleotide as ECSA. Blank represents same nucleotide as All Delhi samples.
  2. #ECSA strains (Accession nos. AF369024.2 and HM045811.1).
Back to article page

Virology Journal

ISSN: 1743-422X