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Table 1 Homology of E0 gene sequence of different RHDV isolates

From: Isolation and identification of a bovine viral diarrhea virus from sika deer in china

  C24V R1935 naqdl SD-1 Bega Y546 CCSYD VEDEVAC ILLC OSLOSS ALD GPE Brescia SM C LN9912 JL BD31 BDVX818 C413
C24V   99.5 91.5 92.7 88.4 88.6 84.9 84.6 85.6 85.2 75.5 75.4 74.5 75.5 76.0 75.8 75.2 77.1 77.0 76.6
R1935 0.6   91.5 92.7 88.6 88.9 85.2 84.8 85.8 85.2 75.5 75.4 74.6 75.5 76.0 75.8 75.3 77.1 77.0 76.5
naqdl 11.8 11.8   91.5 87.7 87.8 86.2 85.5 87.0 85.6 75.6 75.8 75.2 75.3 75.1 74.8 75.1 77.8 77.5 76.9
SD-1 10.0 10.0 11.8   88.1 88.6 84.8 84.7 85.7 85.7 75.1 74.9 74.0 74.9 75.4 75.2 74.7 78.9 78.0 76.7
Bega 16.9 16.5 18.0 17.4   95.1 85.8 85.8 87.4 86.4 74.8 74.9 74.9 74.9 74.5 74.5 76.3 77.7 77.6 76.9
Y546 16.6 16.2 17.9 16.5 6.5   85.5 85.4 86.7 86.5 74.5 74.6 74.7 74.4 73.9 73.9 76.2 79.1 78.2 76.3
CCSYD 22.8 22.4 20.5 23.2 21.2 21.8   98.6 92.7 95.1 76.0 76.1 75.1 75.8 74.7 74.9 75.5 76.6 76.7 77.0
VEDEVAC 23.5 23.1 21.8 23.4 21.2 22.1 1.8   93.4 95.8 76.2 76.3 75.1 76.0 74.9 74.9 75.8 76.9 76.7 77.4
ILLC 21.7 21.3 19.2 21.5 18.6 19.9 10.0 9.0   92.6 76.0 76.2 75.3 76.0 75.5 75.5 76.7 77.4 77.1 77.8
OSLOSS 22.6 22.6 21.6 21.5 20.2 20.0 6.5 5.5 10.3   76.1 76.2 75.2 76.0 75.2 75.2 76.1 77.3 76.6 77.1
ALD 40.9 40.9 40.8 42.3 42.7 43.6 40.1 39.4 39.9 39.6   99.3 94.7 98.6 96.6 96.6 88.2 79.2 79.1 77.6
GPE 41.2 41.2 40.4 42.6 42.4 43.2 39.8 39.1 39.3 39.3 0.9   94.1 97.9 96.1 96.1 88.5 79.4 79.4 77.7
Brescia 43.2 42.9 41.6 44.6 42.1 42.6 42.0 41.9 41.3 41.5 7.1 8.0   94.4 92.8 93.3 87.4 78.3 78.0 76.8
SM 40.9 40.9 41.6 42.6 42.3 43.7 40.5 39.8 39.8 39.7 1.8 2.7 7.5   96.4 96.6 88.3 79.2 79.1 77.3
C 39.8 39.8 42.2 41.4 43.7 45.1 43.3 42.5 41.0 41.8 4.4 5.2 9.8 4.7   99.5 86.8 78.9 78.7 77.8
LN9912 40.3 40.3 42.7 41.9 43.6 45.1 42.6 42.5 40.9 41.7 4.4 5.2 9.2 4.4 0.6   86.8 78.9 78.7 77.6
JL 41.6 41.3 42.0 43.0 38.8 39.1 41.0 40.3 38.1 39.4 17.3 16.7 18.5 17.0 19.7 19.7   78.5 79.0 76.7
BD31 37.2 37.2 35.8 33.5 36.0 33.0 38.3 37.6 36.6 36.8 33.7 33.5 35.6 33.8 34.5 34.5 34.8   92.3 77.4
BDVX818 37.4 37.4 36.5 35.4 36.3 35.0 38.1 38.2 37.2 38.5 33.9 33.4 36.4 33.9 34.9 35.0 33.9 10.6   76.7
C413 38.4 38.7 37.8 38.2 37.8 39.1 37.2 36.5 35.5 36.9 36.2 35.9 37.9 37.0 35.7 36.2 37.9 36.7 38.3