Table 5 Comparison of expression changes of some selected genes between microarray and qRT-PCR
From: Japanese encephalitis virus infection induces changes of mRNA profile of mouse spleen and brain
Gene name | Gene description | Fold change | |
|---|---|---|---|
| Â | Â | Microarray | qRT-PCR |
Spleen | Â | Â | Â |
Cxcl10 | chemokine (C-X-C motif) ligand 10 | 3.418 | 3.375 (±1.065) |
Ifng | interferon gamma | 2.229 | 3.062 (±0.507) |
Gzmb | granzyme B | 6.202 | 7.285 (±0.311) |
Gzma | granzyme A | 4.236 | 3.815 (±0.127) |
Prf1 | Porferin 1 | 1.820 | 2.287 (±0.643) |
Irf7 | interferon regulatory factor 7 | 3.378 | 4.926 (±0.309) |
Il1r2 | Interleukin 1 receptor, type II | 2.069 | 2.078 (±0.105) |
Cd163 | CD163 antigen | 0.060 | 0.083 (±0.017) |
Brain | Â | Â | Â |
Cxcl10 | chemokine (C-X-C motif) ligand 10 | 1760.024 | 13.492 (±1.690) |
Ccl2 | chemokine (C-C motif) ligand 2 | 1387.794 | 188.549 (±8.931) |
Ccl4 | chemokine (C-C motif) ligand 4 | 336.804 | 61.007 (±3.735) |
Casp3 | Caspase3, apoptosis-related cysteine peptidase | 2.119 | 1.207 (±0.073) |
Casp4 | caspase4, apoptosis-related cysteine peptidase | 77.077 | 19.969 (±0.050) |
Socs1 | suppressor of cytokine signaling 1 | 28.609 | 11.182 (±0.845) |
Socs3 | suppressor of cytokine signaling 3 | 36.912 | 4.672 (±0.464) |
Cd163 | CD163 antigen | 0.066 | 0.065 (±0.012) |