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Table 1 Genome components of the Korean echovirus 5 (ECV 5) isolate and comparison of predicted N-terminal cleavage sites for the Korean ECV 5 isolate and the Noyce strain

From: Genetic diversity of a Korean echovirus 5 isolate and response of the strain to five antiviral drugs

Region

Nucleotide sequence

Amino acid sequence

Predicted N-terminal cleavage sites

 

start

end

length

start

end

length

Kor-ECV5

Noyce

5'NCR

1

738

738

-

-

-

-

-

Polyprotein

739

7326

6588

1

2196

2196

-

-

P1

739

3324

2586

1

862

862

-

-

P2

3325

5058

1734

863

1440

578

TR/GA

TY/GA

P3

5059

7326

2268

1441

2196

756

FQ/GP

FQ/GP

VP4

739

945

207

1

69

69

-

-

VP2

946

1731

786

70

331

262

LN/SP

LN/SP

VP3

1732

2448

717

332

570

239

PQ/GL

PQ/GL

VP1

2449

3324

876

571

862

292

LQ/GD

LQ/GD

2A

3325

3774

450

863

1012

150

TR/GA

TY/GA

2B

3775

4071

297

1013

1111

99

EQ/GV

EQ/GV

2C

4072

5058

987

1112

1440

329

RQ/NN

RQ/NN

3A

5059

5355

267

1441

1529

89

FQ/GP

FQ/GP

3B

5356

5421

66

1530

1551

22

FQ/GA

FQ/GA

3C

5422

5970

549

1552

1734

183

VQ/GP

VQ/GP

3D

5971

7326

1386

1735

2196

462

EQ/GE

EQ/GE

3'NCR

7327

7430

104

-

-

-

-

-