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Table 1 Predicted ORFs for eiAU, eiDWF, and eiMSLS, and the most similar BLAST hits for each of the phage ORFs

From: Comparative genomic analysis of bacteriophages specific to the channel catfish pathogen Edwardsiella ictaluri

Ï•eiAU ORF/Strand

Position

Size

Putative function [Nearest neighbor]

Accession #

Best match E value/% aa identity

Presence in

 

Start

Stop

bp

aa

   

Ï•eiDWF

Ï• MSLS

1/-

220

459

240

79

None

  

[+]

[+]

2/+

458

925

468

155

DNA Repair ATPase [Salmonella phage]

YP_003090241.1

1E-49/67

[+]

[+]

3/+

922

1260

339

112

None

  

[+]

[+]

4/+

1319

2668

1350

449

helicase [Enterobacteria phage]

YP_002720041.1

0.0/70

[+]

[+]

5/+

3035

3211

177

58

None

  

[-]

[-]

6/+

3239

4126

888

295

phage methyltransferase [Edwardsiella tarda]

ZP_06713110.1

4E-98/69

[+]

[+]

7/+

4126

4836

711

236

N-6-adenine-methyltransferase [Escherichia coli]

YP_003041971.1

3e-18/45

[-]

[-]

8/+

5164

5526

363

120

None

  

[+]

[+]

9/+

5523

5804

282

93

None

  

[+]

[+]

10/-

6073

5816

258

85

None

  

[+]

[-]

11/-

6581

6060

522

173

hypothetical protein [Phage PY100]

CAJ28429.1

8E-20/38

[+]

[+]

12/-

6869

6603

267

88

None

  

[+]

[+]

13/-

7721

7020

702

233

hypothetical protein [Phage PY100]

CAJ28427.1

2E-09/36

[+]

[+]

14/-

8175

7822

354

117

phage tail assembly chaperone gp38 [Enterobacter sp.]

YP_001178193.1

9e-11/53

[+]

[-]

15/-

9179

8172

1008

335

tail fiber protein [Enterobacteria phage]

NP_037718.1

2e-10/38

[+]

[+]

16/-

12809

9198

3612

1203

phage host specificity protein [Yersinia kristensenii]

ZP_04623740.1

0.0/42

[+]

[+]

17/-

13333

12809

524

174

phage tail assembly protein [Yersinia enterocolitica phage]

YP_001006526.1

8E-50/59

[+]

[+]

18/-

14112

13393

720

239

phage minor tail protein [Enterobacteria phage]

YP_002720062.1

4E-56/48

[+]

[+]

19/-

14887

14117

771

256

phage minor tail protein L [Yersinia pseudotuberculosis]

YP_001721823.1

5E-66/51

[+]

[+]

20/-

15228

14884

345

114

phage minor tail protein M [Enterobacteria phage phi80]

CBH95068.1

1E-12/39

[+]

[+]

21/-

17990

15288

2703

900

phage tail tape measure protein [Enterobacteria phage]

YP_002720065.1

8E-126/38

[+]

[+]

22/-

19188

18862

327

108

gp16 [Sodalis phage SO-1]

YP_003344951.1

5E-20/48

[+]

[+]

23/-

19523

19167

357

118

gp15 [Sodalis phage SO-1]

YP_003344950.1

9E-16/38

[+]

[+]

24/-

20305

19703

603

200

putative major tail protein [Enterobacteria phage]

YP_002720068.1

2E-54/58

[+]

[+]

25/-

20766

20338

429

142

gp13 [Sodalis phage SO-1]

YP_003344948.1

1E-08/38

[+]

[+]

26/-

21395

20763

633

210

gp12 [Sodalis phage SO-1]

YP_003344947.1

6E-53/55

[+]

[+]

27/-

21748

21392

357

118

phage structural protein [Enterobacteria phage]

YP_002720071.1

9E-23/48

[+]

[+]

28/-

21884

21729

156

51

None

  

[+]

[+]

29/-

22387

21887

501

166

hypothetical protein EpSSL_gp33 [Enterobacteria phage]

YP_002720072.1

2E-22/43

[+]

[+]

30/-

23550

22450

1065

353

phage structural protein [Enterobacteria phage]

YP_002720073.1

1E-65/59

[+]

[+]

31/-

24306

23638

669

222

hypothetical protein EpSSL_gp36 [Enterobacteria phage]

YP_002720075.1

1E-39/50

[+]

[+]

32/-

25520

24393

1128

375

phage head morphogenesis protein [Enterobacteria phage]

YP_002720086.1

2E-123/58

[+]

[+]

33/-

26964

25504

1461

486

phage structural protein [Enterobacteria phage]

YP_002720085.1

1E-153/57

[+]

[+]

34/-

28358

26976

1383

460

phage terminase large subunit [Enterobacteria phage]

YP_002720084.1

4E-162/64

[+]

[+]

35/-

28855

28358

498

165

gp1 [Sodalis phage]

YP_003344936.1

2E-24/48

[+]

[+]

36/-

29356

29090

267

88

endolysin [Yersenia Phage PY100]

CAJ28446.1

7E-14/48

[+]

[+]

37/-

29775

29500

276

91

prophage Lp2 protein 33 [Streptococcus pneumonia]

ZP_01821446.1

2E-09/45

[+]

[+]

38/-

30311

29826

486

161

putative lysis accessory protein [Escherichia phage]

YP_512284.1

1E-10/39

[+]

[+]

39/-

30559

30308

381

127

Putative holin [Burkholderia multivorans CGD1]

ZP_03586913.1

5E-05/30

[+]

[+]

40/-

30996

30775

222

73

None

  

[+]

[+]

41/-

31670

31026

645

214

None

  

[+]

[+]

42/-

32769

32128

642

213

Conserved phage protein [Enterobacteria phage]

ADE87955.1

2E-27/37

[+]

[+]

43/-

33112

32882

231

76

None

  

[+]

[+]

44/-

35397

33988

1410

469

phage replicative helicase/primease [Enterobacteria phage]

YP_002720055.1

7E-114/58

[+]

[+]

45/+

35764

36093

330

109

None

  

[+]

[+]

46/+

36115

36282

168

55

None

  

[+]

[+]

47/-

36455

36339

117

38

None

  

[+]

[+]

48/+

36834

37277

444

147

gp46 [Sodalis phage]

YP_003344981.1

5E-04/36

[-]

[+]

49/+

37326

37862

537

178

gp27 [Sodalis phage]

YP_003344962.1

5E-04/40

[+]

[+]

50/+

37865

38098

234

77

None

  

[-]

[+]

51/+

38101

39360

1194

396

gp43 [Sodalis phage]

YP_003344978.1

9E-49/50

[+]

[+]

52/+

39455

40192

738

245

gp41 [Sodalis phage]

YP_003344976.1

4E-56/64

[+]

[+]

53/+

40252

42459

2208

735

DNA polymerase I [Enterobacteria phage]

YP_002720046.1

0.0/64

[+]

[+]

54/+

42470

42748

279

92

gp36 [Sodalis phage SO-1]

YP_003344971.1

1E-22/60

[+]

[+]