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Table 3 Percent nucleotide and amino acid sequence similarities of partial M segment of MJNV* compared with other hantaviruses

From: Genetic diversity of Imjin virus in the Ussuri white-toothed shrew (Crocidura lasiura) in the Republic of Korea, 2004-2010

Strain MJN 04-3 MJN 04-39 MJNV 04-55 MJN 05-8 MJN 05-10 MJN 05-11 MJN 05-14 MJN 08-29 MJN 09-3 MJN 09-21 MJN 09-136 MJN 10-8 TPM CBN HTN SEO PUU SN
MJN 04-3   88.4 98.5 98.7 100 98.5 98.5 98.3 98.5 98.1 98.1 99.4 73.1 58.9 58.4 58.9 60.2 58.9
MJN 04-39 98.3   88.1 88.1 88.3 88.1 88.1 87.9 88.1 87.8 87.8 88.5 72.5 59.1 58.1 57.6 60.6 61.2
MJNV 04-55 100 98.3   98.7 98.5 100 100 99.8 100 98.1 98.1 98.7 72.5 59.3 58.6 59.7 60.6 58.9
MJN 05-8 100 98.3 100   98.7 98.7 98.7 98.5 98.7 98.3 98.3 98.9 72.5 58.9 58.2 59.1 59.6 58.9
MJN 05-10 100 98.3 100 100   98.5 98.5 98.3 98.5 98.1 98.1 99.4 73.1 58.9 58.4 58.9 60.2 58.9
MJN 05-11 100 98.3 100 100 100   100 99.8 100 98.1 98.1 98.7 72.5 59.3 58.6 59.7 60.6 58.9
MJN 05-14 99.4 97.7 100 100 100 100   99.8 100 98.1 98.1 98.7 72.5 59.3 58.6 59.7 60.6 58.9
MJN 08-29 100 98.3 99.4 99.4 99.4 99.4 99.4   99.8 97.9 97.9 98.5 72.3 59.1 58.4 59.5 60.4 58.7
MJN 09-3 100 98.3 100 100 100 100 100 99.4   98.1 98.1 98.7 72.5 59.3 58.6 59.7 60.6 58.9
MJN 09-21 99.4 97.7 99.4 99.4 99.4 99.4 99.4 98.9 99.4   100 98.3 72.3 58.4 57.8 58.6 59.5 58.5
MJN 09-136 99.4 97.7 99.4 99.4 99.4 99.4 99.4 98.9 99.4 100   98.3 72.3 58.4 57.8 58.9 59.5 58.5
MJN 10-8 100 98.3 100 100 100 100 100 99.4 100 99.4 99.4   72.7 58.8 58.2 58.8 60.0 59.2
TPM 82.5 83.1 82.5 82.5 82.5 82.5 82.5 81.9 82.5 81.9 81.9 82.5   57.8 56.9 58.8 60.2 57.0
CBN 49.7 49.2 49.7 49.7 49.7 49.7 49.7 49.2 49.7 49.2 49.2 49.7 52.0   67.4 69.7 66.1 65.3
HTN 53.7 53.1 53.7 53.7 53.7 53.7 53.7 53.1 53.7 53.1 53.1 53.7 53.7 71.8   76.3 68.0 65.0
SEO 52.5 52.0 52.5 52.5 52.5 52.5 52.5 52.0 52.5 52.0 52.0 52.5 53.1 71.8 83.1   67.2 62.3
PUU 59.1 58.5 59.1 59.1 59.1 59.1 59.1 58.5 59.1 58.5 58.5 59.1 55.7 64.8 67.0 67.0   71.8
SN 55.1 54.5 55.1 55.1 55.1 55.1 55.1 55.1 55.1 54.5 54.5 55.1 54.0 67.6 68.2 65.3 69.0  
  1. *MJNV strains 04-3, 05-10, 05-11, 09-3, 10-8 from Paju City; MJNV strains 04-39, 04-55, 05-14 from Yeoncheon-gun; MJNV strains 05-8, 09-21, 09-136 from Pocheon City; MJN strain 08-29 from Pyeongtaek City.
  2. Amino acid similarity shown on bottom triangle and nucleotide similarity shown on top triangle.