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Table 1 Summary of the region, name, CDS and length of genes of Chinese BAV-3 HLJ0955 strain and the nucleotide and putative amino acid identities between HLJ0955 and the prototype of BAV-3 WBR-1 strain

From: Isolation, identification, and complete genome sequence of a bovine adenovirus type 3 from cattle in China

Region Gene CDS (HLJ0955) Gene length (bp) Nucleotide identity
with WBR-1 (%)
Amino acid identity
with WBR-1 (%)
ITR ITR 1-85 85 NDb ND
   34048-34132 85 ND ND
E1A 211R 560-1169, 1277-1302(join) 636 98.6 98.6
E1B 157R 1395-1868 474 98.0 98.1
  420R 1769-3031 1263 96.4 97.9
pIX pIX 3117-3494 378 94.8 97.6
IVa2 IVa2 3531-4661(complementa) 1131 96.3 98.1
E2B Pol 4640-7711(complement) 3072 95.9 96.6
  TP 7930-9882(complement) 1953 83.9 94.8
L1 52K 9912-10907 996 96.3 97.9
  IIIA 11022-12737 1716 93.0 96.8
  III 12852-14300 1449 97.5 96.5
  pVII 14363-14878 516 97.3 97.7
L2 pV 14995-16266 1272 94.1 87.6
L3 pX 16393-16632 240 83.6 98.8
L4 pVI 16792-17586 795 97.8 87.5
L5 Hexon 17733-20459 2727 80.0 94.1
  Protease 20488-21102 615 95.7 98.0
E2A DBP 21219-22517(complement) 1299 96.1 98.4
L6 100K 22544-25096 2553 96.5 96.0
  33K 24729-25553 825 96.9 92.7
  pVIII 25732-26382 651 97.2 97.2
E3 284R 26441-27295 855 95.3 90.9
  121R 27306-27671 366 97.0 97.5
L7 Fiber 27898-30828 2931 93.4 92.7
E4 ORF5 30906-31565(complement) 660 97.4 97.3
  ORF4 31504-31935(complement) 432 96.0 93.1
  ORF3 31957-32763(complement) 807 96.3 97.0
  ORF2 33028-33237(complement) 210 95.7 95.7
  ORF1 33250-33675(complement) 426 91.7 90.8
  1. a represents complimentary strand; b represents "not done"